Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0067 ATGGAGACACATATTGTTATTTCCTTGATCCTTTTCCTGATTCTTACTAAAAGCATAAACTCAATTGCATTTGATGGAAGTAAATCTGAAGGATGGGATAGCACTCACAAGGAACCTGAAAATCATATAGCTTCTATCTTAAGTTATGGGAATGGAATGAAAGAAGAGATGGAAGCAGATGAATGGGAGATGGTGCAAAAGAAAGGAACCCAATTTGTGGTGAATGATCAACCATTCTATGTGAATGGATTCAACACTTACTGGTTGATGGTATTTGCTGCTGATGAGTCCACTAGAGGAAAGGTGACAGAGGTATTCAAACATGCATCCTCAGTTGGTATGTCAGTTTGTAGGACTTGGGCCTTTAATGATGGCCAATGGCGTGCCCTTCAGAAATCTCCATCACTTTATGATGAAGATGTATTCAAGATTTGTCTTGTTTCTTGTGGATATTGGATTTTATATGATGATGATTCTGTCATTGTTGGAACCACACAGGCACTGGATTTTGTGGTGAGTGAAGCAAAGAAATATAAAATAAGACTCATACTATCATTGGTTAACAACTGGGAGGCTTATGGTGGAAAAGCACAATATGTTAAATGGGGCAATGCTGCTGGCTTCAACTTCACTTCTGATGATGACTTCTTTTCACATCCAACTCTCAGAGCCTACTACAAGGCCCATACTGTGCTCAATAGAGTGAATTCATTCACAAACATCACATACAAGGAAGATCCAACAATTTTTGCTTGGGAACTGATGAATGAACCTAGATGCACTTCAGATTCTTCAGGTGATACCTTACAGGAATGGATAAAAGAAATGGCATTCTATGTAAAGAGCATTGATCCAAAACACCTACTGGAGATTGGAGTAGAAGGATTTTATGGGCCCTCCACACCTCAGAGAGTTCAGTTGAACCCAAATTCATATGCTCAACAGGTTGGAACTGATTTTATCAGGAATCATCAGGTTCTTGGTGTGGATTTTGCTTCTGTTCACATGTATCCTGACTCTTGGATTTCACAATCAATTGCTGATAGCCACCTTCCATTTATAAAGTCTTGGATGGAATCACACATAGAAGATGCTGAAAAGTATCTTGAAATGCCAGTTATTTTTGCTGAGTTTGGTGTATCTGCAAAAGATCCTGGCTACAATTCATCATATAGAGACAACCTTATAAACACTGTGTACAAGACCATTTTAAACTCTACAAAGAAAGGAGGTAGTGGTGCAGGAAGCCTTGTGTGGCAGCTCTTTCCTGATGGAACTGATTACATGGATGATGGATATGCAATTATTCTTTCAAAATCTCCTTCCACCTCAAGCATGATTTCCCTTCAATCCACAAGGCTTGACCTATTCAACTCCTTGTGTTCTAAGAGATGTCATTGGGGTTGTAAGAAGAAAAATGTCTTCCAAAAAGTACTCTATCACGACGAGCTCTAA 1455 0.3904 METHIVISLILFLILTKSINSIAFDGSKSEGWDSTHKEPENHIASILSYGNGMKEEMEADEWEMVQKKGTQFVVNDQPFYVNGFNTYWLMVFAADESTRGKVTEVFKHASSVGMSVCRTWAFNDGQWRALQKSPSLYDEDVFKICLVSCGYWILYDDDSVIVGTTQALDFVVSEAKKYKIRLILSLVNNWEAYGGKAQYVKWGNAAGFNFTSDDDFFSHPTLRAYYKAHTVLNRVNSFTNITYKEDPTIFAWELMNEPRCTSDSSGDTLQEWIKEMAFYVKSIDPKHLLEIGVEGFYGPSTPQRVQLNPNSYAQQVGTDFIRNHQVLGVDFASVHMYPDSWISQSIADSHLPFIKSWMESHIEDAEKYLEMPVIFAEFGVSAKDPGYNSSYRDNLINTVYKTILNSTKKGGSGAGSLVWQLFPDGTDYMDDGYAIILSKSPSTSSMISLQSTRLDLFNSLCSKRCHWGCKKKNVFQKVLYHDEL 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0067 484 PANTHER - 7 144 IPR045053 GO:0004553
Lal14g0067 484 PANTHER - 165 484 IPR045053 GO:0004553
Lal14g0067 484 Pfam Cellulase (glycosyl hydrolase family 5) 163 398 IPR001547 GO:0004553|GO:0071704
Lal14g0067 484 SUPERFAMILY (Trans)glycosidases 65 442 IPR017853 -
Lal14g0067 484 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 165 484 - -
Lal14g0067 484 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 7 144 - -
Lal14g0067 484 Gene3D Glycosidases 61 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0067 Lal-Chr14 827743 832440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0067 55 484 Glycoside Hydrolase AT5G01930 68.433 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0067 K19355 - gmx:100801139 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0067 14 827743 832440 Lal14g0067 14 827743 832440 ECH