Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0006 TATACATTACTATTACCAACATGGGATGATGTTATCAAACTCCATATACCTCTCTCTTGGTTCATTCGTACGTACACTGTAACATTGATTGGCTCAAACTCAGACCAAATTCCCCATCCAACTATGACAGAGGACAAAGTCATCATAACATGCCGTAATATCCCACACCTTAAACCCTCTTCTTACGACGTCGTTTATCATCGCCAACCTCTCATTAACCACGCTACCCTCTCTTTCGACGCCAGTGGCATCACTTGTAAATTCGCATGCGTCTCAGTGGCAGAAACGAAATTTCACAAAGAATCCACGCCGACACCGTCTCAGCTTATGAAACACCCGTTGGCCGTTGTCGCACTCGTTCCTAAAGACGCCGCCTTGTTCCTTGCCGGAGCTATTGCTGGCGCCGCCGCGAAGACCGTCACTGCTCCGCTCGACCGGATCAAGCTCCTCATGCAGACTTATGGTGTGAGAGTTGGACAAGAGAGTGCCAAGAAGACGATTAGTTTAGTTGAGGCCGTTACAGTTATAGGGAAGGAAGAAGGCATTAAAGGTTACTGGAAGGGCAACCTCCCTCAGGTGATTCGAGTTATACCCTACAGTGCTGTTCAGCTTTTTGCTTATGAAATTTATAAGAAAATATTCAGAGGAAAGAATGGTGAACTCTCTGTTGTGGGAAGACTTGCTGCAGGTGCGTTTGCTGGCATGACATCCACTTTTATAACTTACCCATTAGATGTACTGAGATTACGATTAGCTGTTGAACCTGGTTGCCGAAGCATGTCAGAGGTTGCCTTGAGCATGCTAAAAGAGGAAGGATTTGCATCTTTCTACTATGGTCTTGGGCCTTCTCTCATTGGAATAGCTCCTTATATTGCAGTGAACTTTTGTGTTTTTGACTTATTAAAGAAGTCGTTGCCAGAGAAGTATCAAAAAAGAACTGAAACGTCACTACTCACTGCTGTGCTTTCGGCATCACTTGCCACGCTTACATGCTATCCTCTGGACACTGTGAGAAGACAGATGCAATTGAAGGGTACACCTTATAAGACAGTATTAGATGCCATTTCAGGTATTGTGGCACGGGATGGTGTTATTGGATTGTATCGTGGATTTGTGCCCAATGCTTTAAAAAATCTACCAAACAGCAGCATCAGGCTTACCACATATGACATTGTTAAACGCCTAATTGCAGCAAGTGAGAAAGAGTTTCGAACGATTACCGAAGAAAACCACAACAAACAAACAAAAACATCAATAGTCTAA 1263 0.4394 YTLLLPTWDDVIKLHIPLSWFIRTYTVTLIGSNSDQIPHPTMTEDKVIITCRNIPHLKPSSYDVVYHRQPLINHATLSFDASGITCKFACVSVAETKFHKESTPTPSQLMKHPLAVVALVPKDAALFLAGAIAGAAAKTVTAPLDRIKLLMQTYGVRVGQESAKKTISLVEAVTVIGKEEGIKGYWKGNLPQVIRVIPYSAVQLFAYEIYKKIFRGKNGELSVVGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGCRSMSEVALSMLKEEGFASFYYGLGPSLIGIAPYIAVNFCVFDLLKKSLPEKYQKRTETSLLTAVLSASLATLTCYPLDTVRRQMQLKGTPYKTVLDAISGIVARDGVIGLYRGFVPNALKNLPNSSIRLTTYDIVKRLIAASEKEFRTITEENHNKQTKTSIV 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0006 420 ProSiteProfiles Solute carrier (Solcar) repeat profile. 121 213 IPR018108 -
Lal14g0006 420 Gene3D Mitochondrial carrier domain 123 396 IPR023395 -
Lal14g0006 420 SUPERFAMILY Mitochondrial carrier 124 391 IPR023395 -
Lal14g0006 420 Pfam Mitochondrial carrier protein 220 307 IPR018108 -
Lal14g0006 420 Pfam Mitochondrial carrier protein 126 217 IPR018108 -
Lal14g0006 420 Pfam Mitochondrial carrier protein 315 397 IPR018108 -
Lal14g0006 420 ProSiteProfiles Solute carrier (Solcar) repeat profile. 311 395 IPR018108 -
Lal14g0006 420 PANTHER SOLUTE CARRIER FAMILY 25 46 409 - -
Lal14g0006 420 PRINTS Mitochondrial carrier protein signature 126 139 IPR002067 GO:0055085
Lal14g0006 420 PRINTS Mitochondrial carrier protein signature 139 153 IPR002067 GO:0055085
Lal14g0006 420 PRINTS Mitochondrial carrier protein signature 188 208 IPR002067 GO:0055085
Lal14g0006 420 PRINTS Mitochondrial carrier protein signature 236 254 IPR002067 GO:0055085
Lal14g0006 420 PRINTS Mitochondrial carrier protein signature 277 295 IPR002067 GO:0055085
Lal14g0006 420 PRINTS Mitochondrial carrier protein signature 320 342 IPR002067 GO:0055085
Lal14g0006 420 PANTHER ADP/ATP CARRIER PROTEIN 46 409 - -
Lal14g0006 420 ProSiteProfiles Solute carrier (Solcar) repeat profile. 221 304 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0006 Lal-Chr14 50155 56679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0006 42 413 Organic Solute Cotransporters AT3G51870 66.667 4.91e-180 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0006 K14684 - gmx:100796878 567.77