Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1662 ATGGTTCTAGGCATGAGAGGAAAGAATAGGAGAAGTGGCACCATTAAAATTGATTACCTTATTCACATTCAGGAGATTAAGCCATGGCCTCCATCACAATCCTTGAGATCCCTTCGCGCTGTATTCATACAATGGAAGAATGGTGAATCTGCATCAGGTTCTACCAATCTGGTTGCCCCTTCACTTGGTTCTGTTATAGGTGAAGGAAGAATCGAATTCGACGAGTCGTTTAGGCTATCTTTAACTTTGCTGAGAGATATGTCAATTAGAGGTGTTGATGCTGATGTTTTCCAAAGAAACTGCGTGGAGTTCGACTTATACGAGCCGCGAAGAGATAAGACTCTTAAAGGTCAATTGTTGGGGACTGCCATTATAGACTTGGCAGATTATGGAATACTTAAAGAGACATTGTCTATTAGTGCACCTATGAACTGCAAGAGGAGCTACCGAAACTCGGATCAGCCACTTTTGTTCATAAAAATTGAGCCTGTCGAACATATTCGCTCGAGTCGATCACCGAAGGACAGCATTTCAAAAGAGGAGTTAAAGGATAAGAATGGTGGTGGCTCTGTATCAGCATTGATAAATGAAGAATACGCCGAGGAAGCCGAGATTTCCTCTTTTACAGATGACGATCTCTCATCACATTCATCTGTGGCAGCAGTTACTACTCCGAAATTAGAAGAGAAAGGATCAGAAAGACAAATTCTAAACACTGTTATTAATGGCAATGAGCATCTACTGGTTTCGGAAACAAGAGTTGAAAACTTGAACATGATGCAACAAGATAGATATGAGAAGTTGGAGAGGAGTTCAAGTAACCCTCCTAGTCATAATTTGTTGTCAAACCAAAAGAAAGTTGTTTCCCCGAGTGCCGATTCGTCTTCTACATCTTTAGTTTGTGACAATATAGATGTAAATTATAGGAGCAGAACACAAAGCAGTGATCATGAAAAATTGGATCAGAATGTTAATGACAAGATTGGTAATTATAGAGATAAATTTGATGTTCAAACAAAGAGTAAAGAAAGTTCTTTTAACATTTATTCAAGACTCTTATCATCTCTAGATACTTCTGAATGCAATGACAAATCAAGCCGGAGATTTGAGGAACCTGACAAACATTGTGTGAAGGAGGAAGTCGGCGATAAAATTTATTACGATTCTCTTGAGAAATGCCGAAGTTACATGGAAGATGAACAAGTGGTAACACATGGTGACAAAGATCAAAACTTACTAGATAGCAGAAGCAATACAATTTCTTTTGGCGGATCAAATAATGCTATGCGGGGAAATATTGTCAGAAGTGAAAGATTAAAGAACATGAAGTCCGAAAAATCATCAGCAGACTCGGCTAGGAATATTGAATCACTCAGTAGCAATCATCATGGTGAAGTAAAGGAAAATGGCATTCTTGGATATGCACAAAACAGTGGAGGGAATATCAGAAGAAATGACAAAGCTATGATTTATCAAAAGGAGGCTAGAAATGCCACTTTAGAAGGGAAAATACAGCATTTTGAAAACAAGATAAAGATACTTGAAGGAGAGTTAATAGAAGCTGCTGCTATTGAGGCTGCATTATATTCAGTAGTTGCTGAGCATGGGCGCTCCACGAGTAAGGTCCATGCCCCGGCTCGGCGACTTTCCAGGCTGTATCTTCATGCGTGTAAGGAAAACATTCAAGGAAGAAGGTTGGGAGCAGCTAAAACTTCTGTATCAGGATTAGTACTTGTTACAAAGGCAAGTGGAAATGATGTACCAAGGTTGACATTTTGGTTATCTAATGCTATAGTGTTGAGAACAGTTATAAGCCAAACCATCAAAGATTTGGTTCAATCAAATCCTGCTGGATCTAGTAGGAGAAGGAAAAGTGAGGGAGAGGGGTATGGCAAGGTAGCATCCTCACTAAAGTCGAAGAATGACGCAGCATTAGGGTATGAAGGTTTCGGTAACTGGGATGATCCTCATGTATTCATATCAGCACTGGAAAAGGTGGAAGCCTGGATCTTCTCTCGGATTGTCGAATCTATCTGGTGGCAGACCTTGACTCCACATATGCAGATTGATACAAACTTGACCGACACAAATGCGAGTTCTACCGGAAGGAAAAGTTATGGAAGGATAACTAGCTCAAGTGATCATGAGCAGGGAAACTTGTCACTAAATATTTGGAAGAATGCCTTTAGGGAAGCCTGTGGAAGGATCTGTCCTATTAGAGCTGAAGGGCATGACTGTGGATGCTTGCCTATGCTGCCGAGATTGATAATGGAGCAGTGCGTGGCAAGATTAGATGTGGCTATGTTCAATGCTATTCTTCGTGAATCTGCTGACGAAATGCCGAATGATCCTGTATCTGATCCTATTAGTGATCCCAAGGTTCTCCCCATTCAACCCGGGAAATCAAGCTTTGGAGCCGGTGCGCAGCTAAAAACTGTGGTTGGAAACTGGTCTAGATGGTTGACTGATCTATTCGGCATGGACGATGATGACTCACTTGAAGATAAAGATGACCCTGATAACAACGATGAGAGACAAAATATATCCTTAAAATCCTTCAATATTCTTAATGCACTAAGTGACCTCCTGATGCTTCCTAAGGATATGCTGTTGCATGCATCAATCAGGAAAGAGGTATGCCCAATGTTTAGTGCATCACTTGTTAAGAAGATTCTACACAATTTTGTCCCAGATGAGTTTTGCCCTGATCCTGTTCCTACTACCGTTTTTGAAGCTCTGGACTCTGCGGATGATACCGAGGTTGGAAAGGAGTATGTCAACAACTTCCCATGCATTGCAGCTCCAATTGTATATTCACCTCCCTCAGTAACTTCCACTGCAAGTATATTTGGAGAGATTGGAAGCAAATCTAAGCTTCAAAGAAGCATATCTTCAATTGTCATGAAGTCATACTCCAGTGATGATGACCTCGATGAATTGAACTCTCCATTATCTTCAATGTTTCTCACTGGCTCCTTGTCGAAGTCGAAAGCAATTCATTATGAATCTCGTGTTCGATACGAACTCCTCCGCCGTGTGTGGAAGAACGACGAGTAG 3057 0.4096 MVLGMRGKNRRSGTIKIDYLIHIQEIKPWPPSQSLRSLRAVFIQWKNGESASGSTNLVAPSLGSVIGEGRIEFDESFRLSLTLLRDMSIRGVDADVFQRNCVEFDLYEPRRDKTLKGQLLGTAIIDLADYGILKETLSISAPMNCKRSYRNSDQPLLFIKIEPVEHIRSSRSPKDSISKEELKDKNGGGSVSALINEEYAEEAEISSFTDDDLSSHSSVAAVTTPKLEEKGSERQILNTVINGNEHLLVSETRVENLNMMQQDRYEKLERSSSNPPSHNLLSNQKKVVSPSADSSSTSLVCDNIDVNYRSRTQSSDHEKLDQNVNDKIGNYRDKFDVQTKSKESSFNIYSRLLSSLDTSECNDKSSRRFEEPDKHCVKEEVGDKIYYDSLEKCRSYMEDEQVVTHGDKDQNLLDSRSNTISFGGSNNAMRGNIVRSERLKNMKSEKSSADSARNIESLSSNHHGEVKENGILGYAQNSGGNIRRNDKAMIYQKEARNATLEGKIQHFENKIKILEGELIEAAAIEAALYSVVAEHGRSTSKVHAPARRLSRLYLHACKENIQGRRLGAAKTSVSGLVLVTKASGNDVPRLTFWLSNAIVLRTVISQTIKDLVQSNPAGSSRRRKSEGEGYGKVASSLKSKNDAALGYEGFGNWDDPHVFISALEKVEAWIFSRIVESIWWQTLTPHMQIDTNLTDTNASSTGRKSYGRITSSSDHEQGNLSLNIWKNAFREACGRICPIRAEGHDCGCLPMLPRLIMEQCVARLDVAMFNAILRESADEMPNDPVSDPISDPKVLPIQPGKSSFGAGAQLKTVVGNWSRWLTDLFGMDDDDSLEDKDDPDNNDERQNISLKSFNILNALSDLLMLPKDMLLHASIRKEVCPMFSASLVKKILHNFVPDEFCPDPVPTTVFEALDSADDTEVGKEYVNNFPCIAAPIVYSPPSVTSTASIFGEIGSKSKLQRSISSIVMKSYSSDDDLDELNSPLSSMFLTGSLSKSKAIHYESRVRYELLRRVWKNDE 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1662 1018 MobiDBLite consensus disorder prediction 265 297 - -
Lal13g1662 1018 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 1 1018 IPR021827 GO:0005643
Lal13g1662 1018 MobiDBLite consensus disorder prediction 272 297 - -
Lal13g1662 1018 ProSiteProfiles C2 NT-type domain profile. 7 165 IPR019448 -
Lal13g1662 1018 MobiDBLite consensus disorder prediction 169 186 - -
Lal13g1662 1018 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 15 134 IPR019448 -
Lal13g1662 1018 MobiDBLite consensus disorder prediction 169 190 - -
Lal13g1662 1018 Coils Coil 497 517 - -
Lal13g1662 1018 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 1 1018 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1662 Lal-Chr13 16386170 16391192 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1662 - - gmx:100818584 1258.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1662 13 16386170 16391192 Lal13g1662 13 16386170 16391192 ECH
Lal10g0132 10 1497593 1505646 Lal13g1662 13 16386170 16391192 PCT
Lal13g1662 13 16386170 16391192 Lal10g0132 10 1497593 1505646 PCT