Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1070 ATGGAGAACTTGTTTAGCCTAGTTGATAATGATCAAGACTTTTTCTCAAGAAGGTGCATTTGGGTCAATGGTCCTGTTATTGTAGGTGCTGGTCCATCAGGGCTAGCCACAGCAGCATGCCTTAGAGAACAAGGGGTGCCATTTATGGTTATTGAAAGAGCAGATTGCATAGCTTCATTATGGCAAAGAAGAACCTATGATAGGTTAAAGCTTCACCTTCCAAAGCAATTTTGCCAACTACCTAACCTTCCATTTCCACAACACTTCCCTGAATACCCATCAAAGAAACAGTTCATTGATTACCTTGAGTCCTATGCAAGGAAATTTAATATCAACCCAAAATTCAATGAGTGTGTTCAGTCTTCAAGGTATGATGAAACCAGTGGCTTGTGGAGGGTTAAGACTGTTGCCACCTGTGGCTTGAACCGAACCGAGTTCGAGTACATTTGCAGGTGGCTTGTGGTGGCCACTGGTGAAAATGCTGAGTGTGTGATGCCTGAAATTGAAGGGTTGGGTGAGTTCAAAGGTGAAATCATCCATGCTGCTGATTACAAGTCAGGGGAAAATTTCAAGGGAAAGAAAGTTCTTGTTGTTGGTTGTGGTAACTCTGGCATGGAACTCTCACTTGATCTTTGCAACCATAATGCATCACCATCATTGGTTTGTCGTAGCTCGGTTCATGTGTTGCCTAGAGAGATTTTCGGGAAATCGACATTCGAATTGGCTTGTTTGATGATGCAATGGTTACCCCTTTGGCTGGTGGACAAGCTACTATTGATCTTTGCATGGTTAGTATTAGGTAACATAGAGAAGTATGGACTCAAAAGGCCATCACAGGGTCCATTGCAGTTGAAAGACACAAAGGGGAAGACTCCTGTTTTAGACATTGGCACCTTGGAGAAAATTAGATCCGGTGACATAAAAGTTGTACAAGGAATTAAGAGGTTAAACAATGACAATGTCGAGCTTGTTAACGGCGAAAACCTTGACATTGATGCCGTGGTGCTCGCCACCGGATACCGCAGCAATGTCCCTTCTTGGCTTCAGGAAGGTGAATTTTTCTCCAAGAATGGATTCCCAAAGTCACCATTCCCTAATGGTTGGAAAGGAAATTCAGGTCTTTATGCAGTTGGGTTCACAAAGAGAGGATTATCTGGTGCTTCATCTGATGCTATGAAAATTGCTCAAGATATTGGTGAAACTTGGAAACAAGAAACTAAGCAAAAGAAACAACACACCACTGCTTGTCATAGACGTTGCATTTCTCAATTCTAA 1275 0.4243 MENLFSLVDNDQDFFSRRCIWVNGPVIVGAGPSGLATAACLREQGVPFMVIERADCIASLWQRRTYDRLKLHLPKQFCQLPNLPFPQHFPEYPSKKQFIDYLESYARKFNINPKFNECVQSSRYDETSGLWRVKTVATCGLNRTEFEYICRWLVVATGENAECVMPEIEGLGEFKGEIIHAADYKSGENFKGKKVLVVGCGNSGMELSLDLCNHNASPSLVCRSSVHVLPREIFGKSTFELACLMMQWLPLWLVDKLLLIFAWLVLGNIEKYGLKRPSQGPLQLKDTKGKTPVLDIGTLEKIRSGDIKVVQGIKRLNNDNVELVNGENLDIDAVVLATGYRSNVPSWLQEGEFFSKNGFPKSPFPNGWKGNSGLYAVGFTKRGLSGASSDAMKIAQDIGETWKQETKQKKQHTTACHRRCISQF 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1070 424 PRINTS Pyridine nucleotide disulphide reductase class-II signature 24 46 - -
Lal13g1070 424 PRINTS Pyridine nucleotide disulphide reductase class-II signature 190 214 - -
Lal13g1070 424 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 11 422 - -
Lal13g1070 424 Gene3D - 24 410 IPR036188 -
Lal13g1070 424 SUPERFAMILY FAD/NAD(P)-binding domain 191 400 IPR036188 -
Lal13g1070 424 SUPERFAMILY FAD/NAD(P)-binding domain 26 298 IPR036188 -
Lal13g1070 424 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 11 422 - -
Lal13g1070 424 PRINTS FAD-dependent pyridine nucleotide reductase signature 25 44 - -
Lal13g1070 424 PRINTS FAD-dependent pyridine nucleotide reductase signature 194 212 - -
Lal13g1070 424 Pfam Flavin-binding monooxygenase-like 27 345 IPR020946 GO:0004499|GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1070 Lal-Chr13 8002907 8005090 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1070 K11816 - gmx:100798190 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1070 13 8002907 8005090 Lal13g1070 13 8002907 8005090 ECH
Lal12g0874 12 7195819 7197410 Lal13g1070 13 8002907 8005090 LSH
Lal13g1070 13 8002907 8005090 Lal11g1105 11 14762787 14765605 PCT
Lal13g1070 13 8002907 8005090 Lal20g0042 20 304744 306900 PCT