Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0397 ATGGGATCCGAAGCTCCCATTAATGTTCTCCTAGTGTCTTTTCCAGGACAGGGTCACATAAACCCTTTGCTTAGACTAGGTAAGTGTCTTGCTTCAAGGGGTTTGTTTGTCACCTTTTCTACCACTGAAGAAACTGGCAAAGATATGCAAGCTGCTAACAACATCACTCAGAAATCAGTTACTGCAGTTGGTGATGGTTTCCTCAAGTTTGAGTTCTTTGAAGATGGTTTGGCACCTGATGACCCCATCAAGAAAAATCTTAATGACCACTTAACACATCTTGAAGTTGTTGGGAAGAAATTTGTGTCTCAAATGATAAAAAAACATGCAGAGGCTAACAACCCAATTTCCTGCATCATAAACAATCCCTTTTTTCCTTGGGTTTCTGATGTTGCTGCTGAACATGGTATTCCTTCTGTTCTTCTCTGGGTTCAATCTTGTGCTGTTTTTACTGCTTATTATCATTACTTTCATAAACTAGTACCTTTCCCTTCACATTCTGAGCCTTTTATTGATGTTCAACTACCTTCTATTGTCCTTAAATACAATGAAATTCCAGACTTTTTGCATCCTTCTAGTCCATTTCCTTTTCTAGGAACAGTCATATTGGAACAATTTAAGAACTTGTCGAAGCCCTTTTGTATATTGGTGGATAGTTTTGATGAGTTAGAAAAGGATTACATCGATTATCTTTCTAAATACTTTCTCATAAGGTCTGTTGGCCCTTTGTTCAAGAACCCAAAAGCACCATTAACCAACACTATCCGTGGTGATTTCTATAAGAGTGATGATTGCATTGAATGGCTAAACTCAAAGCCCCCATCTTCTGTGGTGTACATATCCTTTGGTAGTATTGCATACCTGCCTCAAGAACAAGTAGTTGAAATTGCTTTTGGCCTTGTTAACTCTAAGGTTTCATTTTTATGGGTACTAAAACCACCTCCTAAGGAATGGAATGTCCAACCTCATGTTCTACCAAATGGGTTCTTGGAAGAAACTAGTGACAAAGGCAAAGTAGTTCAGTGGAGTCCACAAGAACAAGTACTTGCTCATCCTTCAGTTACATGTTTCCTTACACACTGTGGATGGAATTCTTCTATGGAAACACTCACTTTGGGTGTGCCAGTGTTGACATTTCCAGCATGGGGTGACCAAGTTACAAATGCAAAGTATTTAGTTGATGTGCTTGGGGTAGGGATTAGATTGGGTTATAGCCAAGCTGAGAATAAATCAGTGACTAGAGATGAAGTGAAAAAGTGCTTATTGGAAGCAACAGTAGGGTCAAAAGCAGAGGACTTGAAGAAAAATGCACTCCGGTGGAAGAAGGCGGCAGAGGCAGCGGTGGTCATTGGTGGTTCATCTGACCGGAATCTTGATGCATTAGTGGAAGATATTAAGAAGCGTGGCAATCTTAAAATCTAA 1422 0.3973 MGSEAPINVLLVSFPGQGHINPLLRLGKCLASRGLFVTFSTTEETGKDMQAANNITQKSVTAVGDGFLKFEFFEDGLAPDDPIKKNLNDHLTHLEVVGKKFVSQMIKKHAEANNPISCIINNPFFPWVSDVAAEHGIPSVLLWVQSCAVFTAYYHYFHKLVPFPSHSEPFIDVQLPSIVLKYNEIPDFLHPSSPFPFLGTVILEQFKNLSKPFCILVDSFDELEKDYIDYLSKYFLIRSVGPLFKNPKAPLTNTIRGDFYKSDDCIEWLNSKPPSSVVYISFGSIAYLPQEQVVEIAFGLVNSKVSFLWVLKPPPKEWNVQPHVLPNGFLEETSDKGKVVQWSPQEQVLAHPSVTCFLTHCGWNSSMETLTLGVPVLTFPAWGDQVTNAKYLVDVLGVGIRLGYSQAENKSVTRDEVKKCLLEATVGSKAEDLKKNALRWKKAAEAAVVIGGSSDRNLDALVEDIKKRGNLKI 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0397 473 CDD GT1_Gtf-like 8 465 IPR002213 GO:0008194
Lal13g0397 473 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 5 469 - -
Lal13g0397 473 PANTHER UDP-GLYCOSYLTRANSFERASE 84A1 5 469 - -
Lal13g0397 473 Gene3D Glycogen Phosphorylase B; 254 446 - -
Lal13g0397 473 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 264 400 IPR002213 GO:0008194
Lal13g0397 473 Gene3D Glycogen Phosphorylase B; 12 458 - -
Lal13g0397 473 ProSitePatterns UDP-glycosyltransferases signature. 342 385 IPR035595 -
Lal13g0397 473 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0397 Lal-Chr13 2495986 2497407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0397 6 465 Glycosyltransferase AT4G15480 56.897 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0397 - K23279 gmx:100804361 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0397 13 2495986 2497407 Lal13g0397 13 2495986 2497407 ECH