Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0396 ATGGCTTTCACTGAGTTCCGACCACTCGATGAGAAGTCGCTAATTGAATACATCAAATCCGTGCCAGCACTCTCCTCCAAGCTCGCCAACAACTTCAACAACATAACCATCAAAGAAGTCGGAGATGGCAACCTTAATTTCGTCTTCATTGTCTCTAACTCCTCGGGTTCTTTTGTCATCAAACAGGCTCTTCCGTACGTTCGATGTATAGGAGAATCATGGCCCATGACAAAGGAGAGAGCATATTTTGAGTCACTGGCTCTTAAAGAAGAGGGTCGATTGAGCCCTGAGCATGTTCCAGAAGTGTATCACTTTGATCGCACTATGTCTTTGATCGGAATGCGTTATCTTGAGCCTCCACACATAATCCTTAGAAAAGGGTTGATTGCTGGGGTTGAGTACCCTTTCCTTGCACGCCACGTCTCTGATTTCATGGCAAACACACTTTTCTTCACCTCTCTCCTTTTCCGTTCAACCACTGATCATAAACGGGATGTTGCCGAATTTTGCGGGAATGTGGAGTTATGCAGGCTTACTGAGCAAGTTGTTTTCTCTGACCCATATAAAGTTTCTGAATATAATCGTTGGACTTCTCCTTATCTTGATGGTGATGCTGAGGCTGTTCGAGAAGACAATCTGTTGAAGCTTGAAGTTGCTGAGCTGAAATCTAAGTTCATTGAGAGGGCCCAGGCACTAATACACGGAGATCTGCACACTGGTTCTGTGATGGTTACTCAAGAATCAACTCAAATCATTGATCCCGAATTTGCATTTTATGGACCAATGGGCTTTGACATTGGAGCATTCTTGGGAAACTTGATTTTGGCTTTCTTTGCTCAAGATGGGCATGCTACCGAATCCAATGATCGAAAAGCATATAAGGAGTGGATTCTGAAGACAATTGAAGATATTTGGAATCTTTTCCACCAAAAATTCATTGCACTTTGGGACGAGCACAAAAATGGTGCTGGTGAGGCATATCTTCCTGGAATCTATAACAACTCAGAGGTGCAGCTGCTTGTACAGAAGAAATACATGACAGATTTGTTTCATGACAGCATTGGATTTGGTGCTGCCAAAATGATAAGGAGAATTGTTGGTGTAGCACACGTTGAGGATCTTGAATCCATTACCGATGCTGCCAAGCGTGCAGCCAGCGAAAGGCGAGCACTTGATTTAGCTAAGACCCTTCTCAAGGAAAGAAGAAAATATGAAGCCATTTCTGACATTATTGCAGCAATTCGCCAATTCTAA 1254 0.4322 MAFTEFRPLDEKSLIEYIKSVPALSSKLANNFNNITIKEVGDGNLNFVFIVSNSSGSFVIKQALPYVRCIGESWPMTKERAYFESLALKEEGRLSPEHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGVEYPFLARHVSDFMANTLFFTSLLFRSTTDHKRDVAEFCGNVELCRLTEQVVFSDPYKVSEYNRWTSPYLDGDAEAVREDNLLKLEVAELKSKFIERAQALIHGDLHTGSVMVTQESTQIIDPEFAFYGPMGFDIGAFLGNLILAFFAQDGHATESNDRKAYKEWILKTIEDIWNLFHQKFIALWDEHKNGAGEAYLPGIYNNSEVQLLVQKKYMTDLFHDSIGFGAAKMIRRIVGVAHVEDLESITDAAKRAASERRALDLAKTLLKERRKYEAISDIIAAIRQF 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0396 417 TIGRFAM MTRK: S-methyl-5-thioribose kinase 38 412 IPR009212 GO:0009086|GO:0046522
Lal13g0396 417 PANTHER METHYLTHIORIBOSE KINASE 2 416 - -
Lal13g0396 417 SUPERFAMILY Protein kinase-like (PK-like) 6 416 IPR011009 -
Lal13g0396 417 Gene3D - 121 417 - -
Lal13g0396 417 PIRSF MTRK 1 417 IPR009212 GO:0009086|GO:0046522
Lal13g0396 417 PANTHER METHYLTHIORIBOSE KINASE 2 416 - -
Lal13g0396 417 Pfam Phosphotransferase enzyme family 36 271 IPR002575 -
Lal13g0396 417 Gene3D Phosphorylase Kinase; domain 1 1 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0396 Lal-Chr13 2485265 2489715 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0396 K00899 - gmx:100818359 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0396 13 2485265 2489715 Lal13g0396 13 2485265 2489715 ECH