Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0388 ATGGCCATCACCGTTCAAACCTTGGAAGACAGGTATATTGCTTCTTGCAGGAGACATGGTGTTGTGCCTAATACTACTATTTTGGCAAGCTTTTTCAAGTCTGAGATCAAAAAGTCCTGCAAAGAGCTGTGCACCCTGGAGATTTTTATTGATGACCTTAACGATATTGATTGTGCTCCACTTCTTGACGTATGCATGAACCTTGATACTTCTGAAATAGAAGCTGTTGACTTACGTAATGAATCGACATGCGCATTAAATGGAGAATTTGCATTGTCATTGATGCGTGCTATTAACCAAAAGCTTCGAGTAGTTGATCTACAGGATCTGTCATTTGGAAAAGACTTCTTACGGGATATCTCACAAAGAGGTTTAGCATGCCAAGTTTTGATATTGAGGTCTTCACATTTCCGGAAGCTAAATTTGACTGGGAAGTTCATGCAGATGCACACCCTTGATCTTGATTTTAGTTCATCTCTTACCAGTTTCCAGGAGGACTGCTTTAATTGCATGCCCAATCTAATGCGCCTCTCAATGTGCGAGACACGGATTACAAATCTTTGGACAACTGTTGCAGCTCTGTCTAAGCTCCCTTCTTTGGTTGAACTAAGGTTTCAATATTGGCAATGCTGCAATGATGCTGGGACATCTTTTATCTCATCCTGTAGGAAGTCAGATAGCACTGTTGATCTTGGCCTGCTTAATAGAGTTCCTTTTACTGGCGAATCTTTCACTGATACAAGGGTACTGACAGATCCTAACTTCAGTGCAGAAGATCCACTGATAAATTTGTATTCATTTAATGAAGAAGTTATAAATCACGATGTTCAAAGCATGGATGAGGATTCATCAGATGATAGTGAAGTGGACTTTACTAGTCATCATCATAGATTCTGGTTGTCAGATGTGTTTCCTGGGTGGAATTTTCAAGTGCCTATTCAGAACGAGAATGAAGATGGAGAAGATTCATCACAAGGTGCCTTTACAGAGCATACTACTGATGTTTCTATGAAGTATATGTCTTGTCATGCATCACCAATATGCTATGAGAAACATTACAGAGAGTTCATGATAGCTTCATTATCAAATCTGAAAGTTTTAGATAATTTGACTATCAGAAATAGTGACAGGGAAAGGGCTTCTGGAATATATTCTCAATACTTTCAATATCTTCCATATGGATGGAAGCAAAAAGAGAGTTTGGTAAGTATCCTACTTAAGCGAGAAATAAAATCAGGCCACATTAAGGTGGGAACTTCCAAGTCTAGACCGTCCTATCCTTCTGGAGAGTCCAAATACTTTTATACCAGGTCTCTATCTGCTGCTAAAATGGGGTCTTCAACTTGGCCTTCCTTGCACCCCCTTTCTCTTTTAGGATGTGAATTGGATAGGGGCTTTCGTCCAAGGCAGTTTGAGTACCATCCTTCTGACTCTAGCTTGATGGTCCTTGGAACTCTAGATGGTGAAGTAATTGTCATCAACCATGAGAATGAACATATTGTGAGTTATATCCCATCACTTGGAGCAATGAATAGTGTCTTGGGTCTCTGTTGGCTCAAACAATATCCCTCCAAGCTTATAGCAGGTTCAGACAATGGTTCCCTGAAATTGTATGACATCCACCATATACCAAGAAAAAGTACTGGCGCATATAGGAATTCTGGTTGTGTCAACTTTGATGAGTTTGACCAGTTGACATCTGTTCATGTTAACTCTACGGATGAATTATTTCTTGCAAGTGGTTACTCAAGAAATGTTGCTTTGTATGACATCAACAATGGAAAGCGCTTACAAGTGTTCACAGATATGCATTCTGGGCATATTAATGTAGTCAAATTTGCAAATCATTCCCCGTCAATTTTTGCCACTTCTTCATTTGATCAGGATGTCAAGATGTGGGACTTGAGACAGAAACCAATATATCCTTGCTTCACTACTTCAAGTTCAAAAGGAAATGTGATGGTTTGCTTTTCTCCAGATGACCGATATATTCTAGCATCAGCAGTTGATAATGAGGTTAGACAGATTTCGGCTGCTGATGGTAGGCTTCACTTGGTTTTTGATATAGCTCCCACTGGAAGTTCTCAGAACTACACCCGTTCTTATTACATGAATGGGAGGGACTACATTATTAGTGGTAGTTGTGATGAACATGTTGTCCGTGTTTGCTGTGCTCAAACCGGAAGACGCCTAAGAGATGTATCCCTTGAGGGAAAAAGCTTAGGAAGTTCCATGTTTGTTCAGTCTCTGAGGGGTGATCCTTTCCGGGATTTCAATATGAGTGTATTAGCAGCCTACATGCGTCCTGGCTCCAAGTCTGAAATTGTCAAGATTAACTTACTAGCATCTAGTGGCCATGCCAATGATGATCCTGATGAGGAGCGCCCCTGCCCATCTCATAGTCTTGGAGCTTGA 2415 0.4054 MAITVQTLEDRYIASCRRHGVVPNTTILASFFKSEIKKSCKELCTLEIFIDDLNDIDCAPLLDVCMNLDTSEIEAVDLRNESTCALNGEFALSLMRAINQKLRVVDLQDLSFGKDFLRDISQRGLACQVLILRSSHFRKLNLTGKFMQMHTLDLDFSSSLTSFQEDCFNCMPNLMRLSMCETRITNLWTTVAALSKLPSLVELRFQYWQCCNDAGTSFISSCRKSDSTVDLGLLNRVPFTGESFTDTRVLTDPNFSAEDPLINLYSFNEEVINHDVQSMDEDSSDDSEVDFTSHHHRFWLSDVFPGWNFQVPIQNENEDGEDSSQGAFTEHTTDVSMKYMSCHASPICYEKHYREFMIASLSNLKVLDNLTIRNSDRERASGIYSQYFQYLPYGWKQKESLVSILLKREIKSGHIKVGTSKSRPSYPSGESKYFYTRSLSAAKMGSSTWPSLHPLSLLGCELDRGFRPRQFEYHPSDSSLMVLGTLDGEVIVINHENEHIVSYIPSLGAMNSVLGLCWLKQYPSKLIAGSDNGSLKLYDIHHIPRKSTGAYRNSGCVNFDEFDQLTSVHVNSTDELFLASGYSRNVALYDINNGKRLQVFTDMHSGHINVVKFANHSPSIFATSSFDQDVKMWDLRQKPIYPCFTTSSSKGNVMVCFSPDDRYILASAVDNEVRQISAADGRLHLVFDIAPTGSSQNYTRSYYMNGRDYIISGSCDEHVVRVCCAQTGRRLRDVSLEGKSLGSSMFVQSLRGDPFRDFNMSVLAAYMRPGSKSEIVKINLLASSGHANDDPDEERPCPSHSLGA 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0388 804 Gene3D - 465 752 IPR015943 GO:0005515
Lal13g0388 804 Gene3D Ribonuclease Inhibitor 90 241 IPR032675 -
Lal13g0388 804 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 601 636 - -
Lal13g0388 804 ProSiteProfiles Trp-Asp (WD) repeats profile. 601 636 IPR001680 GO:0005515
Lal13g0388 804 MobiDBLite consensus disorder prediction 785 804 - -
Lal13g0388 804 PANTHER BNAC09G30780D PROTEIN 2 789 IPR046377 GO:0071493|GO:0080008
Lal13g0388 804 SUPERFAMILY L domain-like 99 214 - -
Lal13g0388 804 SUPERFAMILY WD40 repeat-like 467 734 IPR036322 GO:0005515
Lal13g0388 804 SMART WD40_4 555 590 IPR001680 GO:0005515
Lal13g0388 804 SMART WD40_4 639 677 IPR001680 GO:0005515
Lal13g0388 804 SMART WD40_4 497 539 IPR001680 GO:0005515
Lal13g0388 804 SMART WD40_4 593 634 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0388 526 683 Miscellaneous Gene Families AT5G08390 25.625 9.27e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0388 - - gmx:100806443 1320.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0388 13 2436954 2445608 Lal13g0388 13 2436954 2445608 ECH