Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0378 ATGGTAGTAGCTACCATTTCAGAAGCTTCAAGACAACAACAACAATCTGAGAATAATGGGAATGGTAGCAGCATACCCAGAAGAACCAAAGGGAGACAAGTTTCTTCAAGATATATGTCTCCTTCACCTTCTTCAATCTCCACTTCAACAACAACTACTGCAACTTCTTCTTCTAGAAGATTCCAATCCCCGCTTTTGTCCCGGTCCACCAATTCGACACCTTTAGTTCCGACGCGGTCGCTATCGGTGGAACGGCGGCGACCTAGACCCATGTCTTCAGTCACTGGCAATGCCGCCGGCGAGGTCTCCACCGCCGCGGCGAAGCTTCTGGTGACTTCTAGTCGGAGCTTATCGGTTTCGTTTCAAGGGGAGGCCTTTTCGCTTCCGATTAGCAAGGCGAAGACTCCGGTTTCCGGGAATGCGAGGAAAACGGCGGTGACGCCGGAGCGTCGGAGGTCGACGACAGTAAGAGGAGGAGATCAAGGGGAGAATTCGAAACCTGTGGATCAGCACCGGTGGCCGGGTCGGACCCGGAATCCGAATTTGGGTCCGAATAATTTGACTAGAAGTTTGAATGTTGGAATTGGATTTGGGAAAGTGGTGAGAGCATTGGAGGGTAGTGTTAGTGTTAGAAGGACTTCTTTTGATGCAATTGGAGGTGGTTTGAATTTGGGTAAAGATAGTAATAAAGATGAGTTTTTTAAAGGTTCTAATGGGAATTCTAATTCAGTGAATGAGTGTTCATTGCCATTGACACCTTGTGATCTCACTGCTTCTGATACCGATAGTGTCTCGTCTGGTAGCACTTCAGGAGCACAAAACTGTGCTGGTGCTAGTAAGGGATTAAGGGAGCCAAGTGGCATTGTTGTGTCTGCAAGGTTTTGGCAGGAAACCAATAGCCGCTTGCGTCGATTGCAGGATCCCGGTTCACCATTATCAACAAGCCCTTGTTCGAGAATGATGGTTCTGATGAAGAATAATGCCGCTCAGTTGAAAAGGTATACTAGTGATGGTCCTGTGTTGTCACCACAAACTATGACTTCTCCTAGTAGAGGGCATTTGCGGCCTGCTTCACCAAGTAAACTTTGGGCATCGTCGCCATCTAGGGGGAATCCTAGTCCTGCCAGGGTGAGAAGTGTGGTTGCCAGTTCGATCAATAGTAGTTGTAGTAATACACCTTCAATTCTTAACTTCTCTGCTGAGGTGCGGAGAGGGAAGATAGGGGAGGAACGTATTTATGATGCACATACATTGAGGCTTCTGTATAACCGATATGTGCAGTGGCGGTTTGTAAATGCAAGAGCAGATGCTACCTTTATGATGCAGAAACTGAATGCAGAGAGACATTTGTGGAATGCATGGGTAACAATGTCAGAACTTCGGCATTCTGTCATACTTAAAAGAATCAAACTGCTATTGTTGCGGCGAAAGTTAAAGCTAACTTCTATCCTAAAGGGACAGATTTCTTATATGGAAGAATGGTCCCTTCTAGATAGAGATCACTCCAGTTCTTTGATTGGAGCAACTGAAGCTTTGAGGGCCAGTACTCTCCGTCTTCCAGTTGTTGAAAAAGCAATAGCTGATGTACCTAATCTAAAGGATGCATTGGGGTCAGCAGTTGATATGATGCAGGCAATGGGATCCCCAATATACTCTCTTTCATCAAAGGTGGAAGAAACAAACTGCTTGGTGGCGGAAATGCTGAAGATCACCTCAAAGGAAAGGTTTTTACTAGAACAATGCAAGGACTTTTTGTCCGCGTTAGCAGCCATGCAGGTTAAAGATTGTAGCTTAACAACACATATGTTACAACTTTCTAGTGTACCAAATTCCAGCACCTGA 1842 0.4582 MVVATISEASRQQQQSENNGNGSSIPRRTKGRQVSSRYMSPSPSSISTSTTTTATSSSRRFQSPLLSRSTNSTPLVPTRSLSVERRRPRPMSSVTGNAAGEVSTAAAKLLVTSSRSLSVSFQGEAFSLPISKAKTPVSGNARKTAVTPERRRSTTVRGGDQGENSKPVDQHRWPGRTRNPNLGPNNLTRSLNVGIGFGKVVRALEGSVSVRRTSFDAIGGGLNLGKDSNKDEFFKGSNGNSNSVNECSLPLTPCDLTASDTDSVSSGSTSGAQNCAGASKGLREPSGIVVSARFWQETNSRLRRLQDPGSPLSTSPCSRMMVLMKNNAAQLKRYTSDGPVLSPQTMTSPSRGHLRPASPSKLWASSPSRGNPSPARVRSVVASSINSSCSNTPSILNFSAEVRRGKIGEERIYDAHTLRLLYNRYVQWRFVNARADATFMMQKLNAERHLWNAWVTMSELRHSVILKRIKLLLLRRKLKLTSILKGQISYMEEWSLLDRDHSSSLIGATEALRASTLRLPVVEKAIADVPNLKDALGSAVDMMQAMGSPIYSLSSKVEETNCLVAEMLKITSKERFLLEQCKDFLSALAAMQVKDCSLTTHMLQLSSVPNSST 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0378 613 PANTHER AUGMIN FAMILY MEMBER 1 611 - -
Lal13g0378 613 MobiDBLite consensus disorder prediction 334 354 - -
Lal13g0378 613 MobiDBLite consensus disorder prediction 1 99 - -
Lal13g0378 613 MobiDBLite consensus disorder prediction 1 79 - -
Lal13g0378 613 MobiDBLite consensus disorder prediction 361 376 - -
Lal13g0378 613 MobiDBLite consensus disorder prediction 134 187 - -
Lal13g0378 613 PANTHER QWRF MOTIF-CONTAINING PROTEIN 2 1 611 - -
Lal13g0378 613 Pfam QWRF family 263 579 IPR007573 -
Lal13g0378 613 MobiDBLite consensus disorder prediction 334 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0378 Lal-Chr13 2383318 2388217 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0378 - - adu:107467506 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0378 13 2383318 2388217 Lal13g0378 13 2383318 2388217 ECH
Lal12g0387 12 2744874 2750621 Lal13g0378 13 2383318 2388217 LSH
Lal13g0378 13 2383318 2388217 Lal24g0296 24 2126461 2131651 LSH