Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0246 ATGGCGGCGACTCCGACGTGGCAGCCACAGGAGGAAGGCTTCAAGGAGATCTGCGGCCTCCTTGAGCAGCAGATTTCTCATATCTCTTCTGCTGATAAGTCTCAGATTTGGCATCATCTTCACAACTATTCTCACCTCCCTGACTTCAATAATTATCTTGCTTTTATCTTTTCCCGTGCTCAGGGAAAATCGGTGGAGGTTCGACAGGCTGCTGGTCTGTATCTGAAGAATAACCTTAGAACAGGATACAAAGCTATGCTCCCTGCATACCAACAGTATGTGAAATTAGAGTTGCTGCCTTGTCTTGGTGCTGCAGATAAGCACATAAGGTCAACGTCGGGCACTATTATTAGTGCTGTTGTTCAAATAGGAGGACTTGTAGAGTGGCCTGAATTGTTGCAAGCCCTCGTTAATTGCTTGGACAGTAATGATCTAAATCACATGGAAGGTGCAATGGATGCATTATCCAAGATTTGTGAGGATGTTCCTCAATTGCTCGACTCTGATGTACCTGGGTTAGCAGAGCGCCCTATAAACATATTTCTTCCCAGATTATTAAAGTTTTTCCAATCTCCTCATGCTTCATTAAGAAAACTATCATTGGGTTCAGTAAATCAATACATTATGCTAATGCCTTCTGCTTTATACGTATCCATGGACCAATATCTTCAAGGTTTGTTTATTCTTGCAAACGACCCTAATGCAGAAGTTCGGAAATTGGTTTGTGCAGCATTCGTTCAGATAATTGAAGTCTGTCCATCTTTCTTAGAGCCACATCTAAGGAATGTGATTGAATACATGTTACTAGTCAACAAGGACGCAGATGAGGAAGTGGCCCTTGAAGCCTGTGAATTTTGGTCTGCATATTTTGATGCTCAACTGCCACCTGAAAATTTGAGAGAATTCTTGCCTCGTCTGATTCCAGTATTATTGTCAAATATGGCTTATGCAGATGATGATGAATCAGTTATTGAAGCTGAGGAAGATGGTTCTGAACCTGACCGTGATCAGGATCTTAAACCCCGTTTTCATGTATCAAGGTTTCATGGATCAGATGAAGCAGAAGATGAAGATGACGATGTTGTTAACACATGGAATTTACGAAAGTGCAGTGCCGCTGGTCTAGATGTTCTCTCAAATGTTTTCGGAGATGAGATCCTCCCGACTCTTATGCCTATTGTTCAGGCCAAGTTGTCAGCCGGTGGTGATGAAGCCTGGAAAGATAGGGAAGCTGCTGTCTTGGCTCTTGGTGCCATAGGCGAGGGTTGTATCAATGGTCTTTACCCTCATTTACCGGAGATTGTGGGATTTCTCATTCCTCTCCTCGATGATAAGTTTCCACTGATACGAAGTATTTCGTGCTGGACACTCTCACGGTTTAGCAAATTTATTATTCAGGGTATTGGGCATCCAAAAGGCTATGAACAATTTGATAATGTTCTTATGGGTCTTCTGCGAAGAATTTTGGATGATAATAAGCGGGTTCAAGAGGCTGCTTGTTCAGCCTTTGCAACACTGGAAGAGGAGGCTGCTGAAGAGTTGGCACCACGGTTGGAAATTATACTAAAGCACTTGATGATTGCATTTGGGAAATACCAGAGACGAAATCTCAGGATTGTATATGATGCTATTGGAACTTTAGCTGAAGCTGTTGGTGGAGAGCTTAATCGGCCTGGATATCTTGACATTCTCATGCCACCATTAATTGAGAAGTGGCAGCAACTTTCAAATTCAGACAAAGATCTCTTTCCACTCCTGGAAAGCTTTACATCTATAGCACATGCATTGGGTACTGGATTCTCTCAATTTGCTGAACCAGTATTTAGGAGGTGCATAAATATAATACAGGCCCAACAATTTGCAAAGGTTGACCCTGTTGCTGCTGGGGCACAATATGACAAGGAATTCATTGTGTGCTCTCTTGATCTGCTTTCTGGACTAGCAGAGGGCCTTGGCAGTGGCGTAGAGAGCTTGGTTTCACAATGTTCTTTGAGGGACCTACTTCTGCATTGTTGCGTGGATGAAGCCTCTGATGTTCGACAAAGTGCCTTTGCCTTACTTGGAGACCTGTCACGAGTTTGCCCAATTCATTTGCATCCTCGTTTGTCGGAGTTTCTTGAGGCTGCATCCAAGCAGCTGGAAATTTCCAAGGTAAGGGAGGCAATTTCAGTTGCAAATAATGCATGCTGGGCTATTGGAGAATTAGCAGTTAAGGTCCGTCAAGAAATTTCTCCGGTTGTTTTAACTGTAATTTCATGCCTCGTCCCCATTCTTCAACATGCAAAGGAACTCAACAAGTCACTTATAGAAAATAGTGCAATAACTCTGGGGAGGCTTGCATGGGTATGTCCAGAGCTTGTATCACCACATATGGAGCATTTCATGCAACCTTGGTGCACTGCTTTGGCAATGATACGAGATGATATTGAGAAAGAGGACGCGTTTAGGGGTCTTTGTGCTATGGTCAAAGCTAATCCTTCTGGTGCTCTAAGTTCCCTCGTGTATATGTTCAAAGCCATTGCAAGTTGGCATGAAATAAGGAGTGAAGATTTACACAATGATATCTGCCAGGTCTTGAATGGATATAAACAGATGCTGGGCAATGGAGCGTGGGACCAGTGTATGTCTGCTTTGGAGCCCCCAGTGAAAGAAAAGCTTTCAAAATATCAAGTTTAG 2676 0.4316 MAATPTWQPQEEGFKEICGLLEQQISHISSADKSQIWHHLHNYSHLPDFNNYLAFIFSRAQGKSVEVRQAAGLYLKNNLRTGYKAMLPAYQQYVKLELLPCLGAADKHIRSTSGTIISAVVQIGGLVEWPELLQALVNCLDSNDLNHMEGAMDALSKICEDVPQLLDSDVPGLAERPINIFLPRLLKFFQSPHASLRKLSLGSVNQYIMLMPSALYVSMDQYLQGLFILANDPNAEVRKLVCAAFVQIIEVCPSFLEPHLRNVIEYMLLVNKDADEEVALEACEFWSAYFDAQLPPENLREFLPRLIPVLLSNMAYADDDESVIEAEEDGSEPDRDQDLKPRFHVSRFHGSDEAEDEDDDVVNTWNLRKCSAAGLDVLSNVFGDEILPTLMPIVQAKLSAGGDEAWKDREAAVLALGAIGEGCINGLYPHLPEIVGFLIPLLDDKFPLIRSISCWTLSRFSKFIIQGIGHPKGYEQFDNVLMGLLRRILDDNKRVQEAACSAFATLEEEAAEELAPRLEIILKHLMIAFGKYQRRNLRIVYDAIGTLAEAVGGELNRPGYLDILMPPLIEKWQQLSNSDKDLFPLLESFTSIAHALGTGFSQFAEPVFRRCINIIQAQQFAKVDPVAAGAQYDKEFIVCSLDLLSGLAEGLGSGVESLVSQCSLRDLLLHCCVDEASDVRQSAFALLGDLSRVCPIHLHPRLSEFLEAASKQLEISKVREAISVANNACWAIGELAVKVRQEISPVVLTVISCLVPILQHAKELNKSLIENSAITLGRLAWVCPELVSPHMEHFMQPWCTALAMIRDDIEKEDAFRGLCAMVKANPSGALSSLVYMFKAIASWHEIRSEDLHNDICQVLNGYKQMLGNGAWDQCMSALEPPVKEKLSKYQV 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0246 891 PANTHER IMPORTIN BETA 7 889 IPR040122 GO:0006606
Lal13g0246 891 SUPERFAMILY ARM repeat 7 883 IPR016024 -
Lal13g0246 891 Pfam Importin-beta N-terminal domain 38 103 IPR001494 GO:0006886|GO:0031267
Lal13g0246 891 Pfam HEAT-like repeat 406 459 - -
Lal13g0246 891 Gene3D - 4 891 IPR011989 -
Lal13g0246 891 PANTHER TRANSPORTIN 1 ISOFORM 1 7 889 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0246 Lal-Chr13 1553292 1566809 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0246 K18752 - gmx:100792702 1606.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0246 13 1553292 1566809 Lal13g0246 13 1553292 1566809 ECH