Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0241 ATGATGTTTACAACTGAAAAGGTATTGATTGGGGGTGATGGAGTAAACTCTGTGGTTGCAAAGTGGCTAGGCTTCAAGGAGGCTTCACATTCAGGGAGATATGCAATCAGGGGTTCTCCAGAGATGAAGACTAATACTGGGTTTTTGTCAGAGTTCTTGCAGTACTTTGGCAAAGGTTTTCGAGCTGGTTTCTTTCCTTGTGATGACAAGACAGTTTACTGGTTTTTCACTTGGACTCCTAAAGGCCAAGACAATGAGATAGAAGACAATCCAGCTAAGCTGAAGCAATCTATCTTAAACAAACTTGAGAAGATGCCAAGTGATGTTAGATCCTTCATAGAAAACACTGGAATGAATGCTTTCTTATCATTTCCAATGAGATATAGACATCCATGGGAACTCATATTTGGAAATATTAGTAAAGGCAATGTGTGTGTTGTTGGAGATGCTTTGCACCCTACAACTCCGGATCTTGGCCAGGGTGCATGTCTTGCTTTGGAAGATGGGGTTGTTTTAGCCAGGTGCCTAGGTGAGGCCTACTACAAAATAGAGAAGGGTGAACAAGAAGAGGATCAATACAAAAAGATTGAGGAAGGGTTGAAGAAATATGCAAATCAGAGAAGATGGAGATGCATTAATATCATTACTACTTCTTATATACTTGGTTCTGTTCAGGAGGTTTATTCCAAGTTGGCTACCTTCTTTAGGGACAAAGTTTCGGCTGCATTCCTAGCTAGTCTGTTCCTGAAGAAGAGACCATACAACATAATGGAAACAGTTGTTGAAGATATTGTGATAGTGGGAGCTGGAATTGCTGGCCTCACTACTTCCTTAGGACTTCATAGGTTGGGTATCCAAAGCTTGGTATTAGAATCTTCAGAAAGTTTGAGGGCTGCTGGGTTTGCTTTAACCACATGGACAAATGGTTGGAAGGCCTTGGATGCTGTTGGTGTCGGAGACATCCTCCGCCACCAACATGTTCAGCTTCATGGGAATGTCACCACTTCTTTGATCACAGGGCAACAAACATCTACTACTTCTTTTCAGGGCACAGGAAAGCATGGACCCTGTGAAGTTCGTTGTCTTAGAAGGAAGATGTTGTTGGAAGCCCTTACCAAAGAGCTTCCAGGTGGCACTATCAGGTTCATGTCAAAGCTGGTTGCTATTGAGGAATCTGGCTTCTATAAGTTACTCCATCTTGCTGATGGAACAACCATTAAAACCAAGGTATTGATTGGGTGCGATGGAGTAAACTCTGTGGTTGCAAAGTGGCTAGGCTTCAAGGAGGCTTCACATACAGGGAGATATGCAATCAGGGGTTCTTTAGAGATGAAGACTAATCATGGGTTTGAGTCAGCGTTCATGCAGTACTTTGGCAAAGGTTTTCGATCAGGTGTCATTCCTTGTGATGACAAGACAACTTACTGGTTTGTCACTTGGATTCCCAGCAACCAAGGCAGTGAGATAGAAGACAATCCAGCTAAACTGAAGCAATCTATGTTAAACAAACTTGAGAAGATGCCAAGTGATGCTAGATCCTTCATAGAAAACACTGGACTGGATGCTTTCTTATCATTTCCATTGAGATATAGACATCCATGGGAACTCATATTTGGAAATATTAGTAAAGGCAATGTGTGTGTTGTTGGAGATGCTTTGCACCCTGCAACTCCGGACCTTGGCCAGGGTGGGTGTCTTGCTTTGGAAGATGGGATTGTTTTAGCCAGGTGCCTAGGTGAGGCCTTCTCCAAAATAGACAAGGATGAACAAGAAGAGGATCAATACAAAAAGATTGAGGAAGGGTTGAAGAAATATGCAAATCAGAGAAGATGGAGAAGCATTGATGTCATTATTGCTTCTTATATAGCTGGTTATATTCAGGAGGCTGATTCCAAGTTGCGTACCTTTTTTAGGGACAAAGTTTCGGCTGCATTCCTATCCAGTCTGTTCCTGAAGAAGTCAGATTTTGATTGCGGAAAACTAAGCAGCTCCTAG 1995 0.4241 MMFTTEKVLIGGDGVNSVVAKWLGFKEASHSGRYAIRGSPEMKTNTGFLSEFLQYFGKGFRAGFFPCDDKTVYWFFTWTPKGQDNEIEDNPAKLKQSILNKLEKMPSDVRSFIENTGMNAFLSFPMRYRHPWELIFGNISKGNVCVVGDALHPTTPDLGQGACLALEDGVVLARCLGEAYYKIEKGEQEEDQYKKIEEGLKKYANQRRWRCINIITTSYILGSVQEVYSKLATFFRDKVSAAFLASLFLKKRPYNIMETVVEDIVIVGAGIAGLTTSLGLHRLGIQSLVLESSESLRAAGFALTTWTNGWKALDAVGVGDILRHQHVQLHGNVTTSLITGQQTSTTSFQGTGKHGPCEVRCLRRKMLLEALTKELPGGTIRFMSKLVAIEESGFYKLLHLADGTTIKTKVLIGCDGVNSVVAKWLGFKEASHTGRYAIRGSLEMKTNHGFESAFMQYFGKGFRSGVIPCDDKTTYWFVTWIPSNQGSEIEDNPAKLKQSMLNKLEKMPSDARSFIENTGLDAFLSFPLRYRHPWELIFGNISKGNVCVVGDALHPATPDLGQGGCLALEDGIVLARCLGEAFSKIDKDEQEEDQYKKIEEGLKKYANQRRWRSIDVIIASYIAGYIQEADSKLRTFFRDKVSAAFLSSLFLKKSDFDCGKLSSS 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0241 664 SUPERFAMILY FAD/NAD(P)-binding domain 7 251 IPR036188 -
Lal13g0241 664 Coils Coil 588 608 - -
Lal13g0241 664 Coils Coil 186 206 - -
Lal13g0241 664 Gene3D - 4 241 IPR036188 -
Lal13g0241 664 Gene3D - 263 646 IPR036188 -
Lal13g0241 664 Pfam FAD binding domain 263 582 IPR002938 GO:0071949
Lal13g0241 664 Pfam FAD binding domain 9 180 IPR002938 GO:0071949
Lal13g0241 664 SUPERFAMILY FAD/NAD(P)-binding domain 263 651 IPR036188 -
Lal13g0241 664 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 263 285 - -
Lal13g0241 664 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 407 422 - -
Lal13g0241 664 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 543 558 - -
Lal13g0241 664 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 558 574 - -
Lal13g0241 664 PANTHER MONOOXYGENASE 2-RELATED 6 255 - -
Lal13g0241 664 PANTHER MONOOXYGENASE 2-RELATED 260 663 - -
Lal13g0241 664 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 260 663 IPR044560 -
Lal13g0241 664 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 6 255 IPR044560 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0241 Lal-Chr13 1523524 1530762 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0241 262 662 Miscellaneous Gene Families AT5G05320 52.723 7.34e-147 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0241 - - mtr:MTR_1g112780 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0241 13 1523524 1530762 Lal13g0241 13 1523524 1530762 ECH