Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0238 ATGAAGGGTACAAGTTTGTTCAAATATTGTACCCTCCTATTGGCAATTCTTGTTTTGCTCTATAGTTTTCTCTTGAACTGTGCCATGGCTACTGTTTACACTGTTGGTGATCAAGAAGGATGGAATAGTCAGACAAATTATGCTTCATGGGCAGAGGGATATAATTTTAGCCTTGGAGATGTTCTTGTCTCTCATCAAATTTTCGTCCAAAAACTAAGAAAATACTATGTTGAGCAAAAGTATGTGAGAGAGCAACATAATGTGTATGAAGTAACAGAAGACACATTCAGATCCTGTAATACAAGTAGTGGAGTATTGGCGAAATATGATAGTGGAGAAGATGGAGTGAAACTTAATAAGGTGAAGAAATATTGGTTCATTTGTGACATACCAGGACATTGCCTTGGGGGCATGAGGTTTGGAATTGAAGCAATAAATAGCAGCAATGCTACTAACTCCATATATGATACATTAATCCCACAAATTGAACCCACCACTTTGGATAATTCTTGTAGGAACTATATATCTGAAAGATGGAGATTGATTAGGAACTTAATTCCTCTAGGATTATTATTTTTTAACTTGTAA 588 0.3554 MKGTSLFKYCTLLLAILVLLYSFLLNCAMATVYTVGDQEGWNSQTNYASWAEGYNFSLGDVLVSHQIFVQKLRKYYVEQKYVREQHNVYEVTEDTFRSCNTSSGVLAKYDSGEDGVKLNKVKKYWFICDIPGHCLGGMRFGIEAINSSNATNSIYDTLIPQIEPTTLDNSCRNYISERWRLIRNLIPLGLLFFNL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0238 195 ProSiteProfiles Phytocyanin domain profile. 31 146 IPR003245 GO:0009055
Lal13g0238 195 SUPERFAMILY Cupredoxins 30 146 IPR008972 -
Lal13g0238 195 Pfam Plastocyanin-like domain 41 138 IPR003245 GO:0009055
Lal13g0238 195 PANTHER BLUE COPPER PROTEIN 12 154 IPR039391 GO:0009055
Lal13g0238 195 Gene3D - 29 150 IPR008972 -
Lal13g0238 195 PANTHER BLUE COPPER BINDING PROTEIN-LIKE 12 154 - -
Lal13g0238 195 CDD Phytocyanin 31 144 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0238 24 151 Miscellaneous Gene Families AT5G26330 31.538 2.22e-18 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0238 - - gmx:100788784 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0238 13 1510043 1510805 Lal13g0238 13 1510043 1510805 ECH