Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0112 ATGGATGGACCTTTAGGACTTCGGAAAGTCGGCTCGCACTGCTCTATCTCTGAGATGGATGATTTTGATCCGTCACGTCTATTTGACAGGCACCGGTTGAACATAGAGAGGAAGAGATCGTTTGATGAGAGGTCATTTAGTGAGATGTCAGCTAGTTTTTCTAGAGTGGGCTTGGATAATTATGACACGTATTCACCCGGAGGAAGATCTGGTTTTAACACACCTGCCTCGTCTACACGGAATTCATTTGAGCCTCACCCTATGGTTGCTGATGCATGGGAATCCCTCCGAAAATCTCTAGTCCATTTCAGAGGTCAACCAGTTGGCACTATTGCAGCTGTTGATCATCAGTCGGAGGAAGTTCTAAACTATGATCAGGTTTTTGTTCGAGATTTTGTGCCAAGTGCTCTAGCCTTTTTGATGAATGGTGAACCAGAAATAGTTAAGAACTTCTTATTAAAGACACTGCATCTTCAGGGGTGGGAAAAAAGAATAGATCGATTTAAGCTTGGTGAAGGTGTTATGCCGGCTAGCTTCAAAGTCCTTCATGATCCTGTTCGGAAAACTGATACTCTAATTGCAGATTTTGGTGAAAGTGCGATTGGAAGAGTTGCTCCTGTTGACTCTGGATTCTGGTGGATCATTTTGCTTCGTGCTTACACAAAGTCTACAGGGGATTTATCTCTGGCTGAATCACCAGACTGTCAAAAGGGAATGAAGCTAATATTGACTCTATGTTTGTCTGAGGGATTTAATACATTCCCAACTCTGCTTTGTGCTGATGGATGCTCCATGATTGATCGAAGAATGGGAATTTATGGCTATCCTATAGAGATTCAAGCACTTTTCTTCATGGCATTAAGATGTGCTTTGGCAATGCTGAAACAGGACGATGCAGCAGGAAAAGAATGTGTAGAGCGTATTGCGAAGCGTTTGCATGCACTAAGTTATCACATGCGTAGTTATTTTTGGCTCGACTTCCAACAACTAAATGACATTTATCGATATAAGACTGAGGAGTATTCACATACTGCAGTAAATAAGTTTAACGTTATTCCTGATTCAATCCCAGAATGGGTGTTTGACTTTATGCCAACACGTGGTGGCTACTTTATTGGAAATGTCAGTCCAGCCCGGATGGATTTTCGATGGTTTGCTTTAGGCAACTGTGTTGCAATTCTATCTTCTCTAGCAACTTCAGAGCAATCAATGGCTATCATGGATCTTATTGAAGCTCGCTGGGATGAGCTGGTTGGAGAAATGCCCATAAAAATATCTTATCCTGCAATAGAGAGCCACGAGTGGCGAATTGTTACTGGTTGTGATCCCAAAAATACCAGATGGAGTTACCATAATGGAGGATCTTGGCCAGTGCTCCTTTGGCTAGTAACAGCTGCTTGCATCAAAACGGGGCGACCACAAATTGCAAGACGTGCAATCGAGCTTGCTGAGAGTCGTTTACTGAAGGATGGGTGGCCTGAATATTATGATGGTAAGCTTGGGAGATATATTGGCAAACAGGCAAGAAAATACCAAACATGGTCTATTGCAGGCTATCTGGTGGCAAAGATGATGCTGGAGGACCCCTCACACCTGGGGATGATTTCCCTAGAAGAAGATAGGCAGATGAAGCCATTGATTAAAAGATCATCTTCTTGGACATGCTGA 1668 0.4299 MDGPLGLRKVGSHCSISEMDDFDPSRLFDRHRLNIERKRSFDERSFSEMSASFSRVGLDNYDTYSPGGRSGFNTPASSTRNSFEPHPMVADAWESLRKSLVHFRGQPVGTIAAVDHQSEEVLNYDQVFVRDFVPSALAFLMNGEPEIVKNFLLKTLHLQGWEKRIDRFKLGEGVMPASFKVLHDPVRKTDTLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDLSLAESPDCQKGMKLILTLCLSEGFNTFPTLLCADGCSMIDRRMGIYGYPIEIQALFFMALRCALAMLKQDDAAGKECVERIAKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVIPDSIPEWVFDFMPTRGGYFIGNVSPARMDFRWFALGNCVAILSSLATSEQSMAIMDLIEARWDELVGEMPIKISYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLVTAACIKTGRPQIARRAIELAESRLLKDGWPEYYDGKLGRYIGKQARKYQTWSIAGYLVAKMMLEDPSHLGMISLEEDRQMKPLIKRSSSWTC 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0112 555 SUPERFAMILY Six-hairpin glycosidases 101 522 IPR008928 GO:0005975
Lal13g0112 555 PANTHER ALKALINE/NEUTRAL INVERTASE CINV2 5 554 - -
Lal13g0112 555 Gene3D - 117 523 IPR012341 GO:0005975
Lal13g0112 555 Pfam Alkaline and neutral invertase 92 529 IPR024746 GO:0033926
Lal13g0112 555 PANTHER - 5 554 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0112 Lal-Chr13 698056 705213 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0112 - - gmx:100803655 1077.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0132 12 922760 927683 Lal13g0112 13 698056 705213 LSH
Lal13g0112 13 698056 705213 Lal24g0108 24 727028 732576 LSH