Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0107 ATGGCTCACATTCTTCACACTCCATTTCTCACTTCTTCCACTTCCCTTCGCCGTAACCCTAACATTACTCAATCTCGTTCTTCTTCTTCTTCTTCTTCTCCGAATGTGGTTCGTGCTAAAATCCGTGAGATTTTCATGCCTGCTCTCAGTTCCACTATGACTGAGGGTAAAATCGTCTCTTGGCTTAAATCTGAAGGTGACAAGCTTTCTAAAGGTCAAAGCGTCGTTGTTGTTGAATCTGATAAAGCTGATATGGATGTTGAAACTTTCTATGACGGTTACCTCGCTGCTATTATAGTTGATGAAGGTGATGTCGCTACCGTTGGATCTCCCATTGCTCTTCTCGCTGAATCTCAAGATGAGATTTCTTTGGCAATTTCCAAAGCTCAATCATTATCATCATCATCATCATCATCATCGATAACTTCTGATTCGTCTTCACCTCCACCTGCTGAGGTTGCGGTTAAGGCTCCGGTGGTGGCGCCGGTGGTTGCAGTTGCCTCGACGCATCCGGCGTCAGAGGGAGGGAAGAGGATAGTGGCATCGCCGTATGCGAAGAAATTGGCCAAGGAGTTGAAGGTGGAGTTAGAGAGAGTTTTTGGAACTGGACCTTTGGGTAGGATTGTGGCAAAGGATGTTGAGGCTTTCGCAGCTTCTGCTCCTTCTCTCACTGTTACACCGGCGGCCGTGGCGGCGGTGGCGCCTTCAGGAGGGGTTGATTTGGGAAGTGTGGTGCCTTTTACTACAATGCAGAATGCTGTGAGTAGGAATATGGTGGAGAGTTTGGCAGTACCTACTTTTAGAGTTGGTTACACCATTACCACTGATGCACTTGATGCTCTCTACAAAAAGATCAAGTCAAAGGGAGTTACTATGACAGCATTGCTTGCCAAGGCTACAGCACTTGCTCTGGCTAAACACCCTGTTATAAACTCTAGTTGTAGAGATGGTAATAGCTTCACATATAATAGCCACATCAACATTGCAGTTGCTGTCGCCACGGATGGTGGACTGATTACACCAGTGCTTGAGGATGCTGATAAGGTTGATGTCTATTCATTGTCAAGAAAGTGGAAAGAGTTGGTCGATAAGGCCCGTGCAAAGCAGCTGCAACCTCATGAATACAGCACAGGTACTTTCACTCTTTCCAACCTGGGAATGTTTGGTGTTGATCGCTTTGATGCTATTCTGCCTCCTGGAACTGGAGCAATAATGGCTGTTGGAGCATCACAGCCAACTGCTGTGGCTACCAAGGATGGTCGCATTGGCCAGAAGAACCAAATGCAGGTCAATGTTACGGCTGATCATCGTGTGATCTATGGTGCTGATCTGGCATCATTCTTGCAAACCCTGTCACAGATCATTGAGGACCCTAAGGATCTTACTTTCTAG 1392 0.4662 MAHILHTPFLTSSTSLRRNPNITQSRSSSSSSSPNVVRAKIREIFMPALSSTMTEGKIVSWLKSEGDKLSKGQSVVVVESDKADMDVETFYDGYLAAIIVDEGDVATVGSPIALLAESQDEISLAISKAQSLSSSSSSSSITSDSSSPPPAEVAVKAPVVAPVVAVASTHPASEGGKRIVASPYAKKLAKELKVELERVFGTGPLGRIVAKDVEAFAASAPSLTVTPAAVAAVAPSGGVDLGSVVPFTTMQNAVSRNMVESLAVPTFRVGYTITTDALDALYKKIKSKGVTMTALLAKATALALAKHPVINSSCRDGNSFTYNSHINIAVAVATDGGLITPVLEDADKVDVYSLSRKWKELVDKARAKQLQPHEYSTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGASQPTAVATKDGRIGQKNQMQVNVTADHRVIYGADLASFLQTLSQIIEDPKDLTF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0107 463 CDD lipoyl_domain 43 115 - -
Lal13g0107 463 Gene3D - 167 220 IPR036625 GO:0016746
Lal13g0107 463 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 180 217 IPR004167 GO:0016746
Lal13g0107 463 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 66 95 IPR003016 -
Lal13g0107 463 Pfam e3 binding domain 179 214 IPR004167 GO:0016746
Lal13g0107 463 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 5 OF PYRUVATE DEHYDROGENASE COMPLEX, CHLOROPLASTIC 17 463 - -
Lal13g0107 463 SUPERFAMILY CoA-dependent acyltransferases 244 461 - -
Lal13g0107 463 MobiDBLite consensus disorder prediction 15 35 - -
Lal13g0107 463 ProSiteProfiles Biotinyl/lipoyl domain profile. 41 116 IPR000089 -
Lal13g0107 463 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 244 461 IPR001078 GO:0016746
Lal13g0107 463 Gene3D - 241 462 IPR023213 -
Lal13g0107 463 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 172 218 IPR036625 GO:0016746
Lal13g0107 463 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 17 463 IPR045257 GO:0006086|GO:0045254
Lal13g0107 463 Pfam Biotin-requiring enzyme 43 114 IPR000089 -
Lal13g0107 463 SUPERFAMILY Single hybrid motif 40 123 IPR011053 -
Lal13g0107 463 Gene3D - 37 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0107 Lal-Chr13 673407 677182 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0107 1 463 Acyl Lipid Metabolism Gene Families AT1G34430 73.673 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0107 K00627 - gmx:100799926 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0107 13 673407 677182 Lal13g0107 13 673407 677182 ECH