Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal13g0080 | ATGGCCAAGAAGAGAAAATCCATAGCCACTACCTTGGACGAGGTGGATCGAACCATGTACGCATCTTTTTGCACTGCTGCTAGTTCTCTTTCCCAGCTATACACTCAGGCCACCAACCACCACAAGCTCTCTTTTCAAGCCGGTGAACGCCACGGCCTCGAAAAACTTTATCAGTGGATATGGGGAGAACAAGAGGGAGGATCAAGAGTTTCAACAGTTGATATACTTAACTACATTCAGAATGAGCTGGATTATTGTGGAGAAGAGCCATCCATGTCGCCCAGAGCACTGCCGCAACATTCACAACCGGTATCAAACTCAGGCTTTCCAGTTAGTTCAGGATCTTCTGGCCTAACAGTTGTTGGACAACAGGGACTCCGGCCTGAGCAATGCGATAATCAATCAAAGAATTCTGTGTTTTCAAATGCTTTATCAAGCCCCATTCGCCGCAGTCTCCAGCATTATCAAATTAGTGGGGAGGGGAACCACCCTGGTGGTCTCTCTATGGGGAATGGAAACCGGAACAGTGAAGTAAGCTTTCTTCACCAACAAGGTAGGGATTCATCTACATTAAATTCCAATGATTCTGCCATGGACATGCACTCAGACTAG | 612 | 0.4673 | MAKKRKSIATTLDEVDRTMYASFCTAASSLSQLYTQATNHHKLSFQAGERHGLEKLYQWIWGEQEGGSRVSTVDILNYIQNELDYCGEEPSMSPRALPQHSQPVSNSGFPVSSGSSGLTVVGQQGLRPEQCDNQSKNSVFSNALSSPIRRSLQHYQISGEGNHPGGLSMGNGNRNSEVSFLHQQGRDSSTLNSNDSAMDMHSD | 203 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal13g0080 | 203 | PIRSF | UCP009193 | 1 | 203 | IPR016549 | - | |
| Lal13g0080 | 203 | MobiDBLite | consensus disorder prediction | 157 | 176 | - | - | |
| Lal13g0080 | 203 | MobiDBLite | consensus disorder prediction | 90 | 121 | - | - | |
| Lal13g0080 | 203 | MobiDBLite | consensus disorder prediction | 182 | 203 | - | - | |
| Lal13g0080 | 203 | PANTHER | NUCLEAR RECEPTOR FAMILY 2 GROUP C PROTEIN | 1 | 203 | - | - | |
| Lal13g0080 | 203 | MobiDBLite | consensus disorder prediction | 95 | 121 | - | - | |
| Lal13g0080 | 203 | Pfam | Domain of unknown function (DUF4588) | 16 | 202 | IPR029196 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal13g0080 | Lal-Chr13 | 524935 | 528347 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal13g0080 | - | - | gmx:100793841 | 295.049 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal13g0080 | 13 | 524935 | 528347 | Lal13g0080 | 13 | 524935 | 528347 | ECH | |
| Lal12g0097 | 12 | 651438 | 654855 | Lal13g0080 | 13 | 524935 | 528347 | LSH |