Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0072 ATGGCGTTCTCGATTTCAGCATCCTCTACTCTTGTTTCTTTCAACTCCCAACGCTCCACCCTTCTTGTAGCAACTTCTTCATCTTCCACAAAACTATACTCGTTTTCATCGATTCAATTTCCTGTTCATACTCAACTTCTTCAGATTCCAATCTCCTCTTCATCGCGCCCTCGAATCCTTCCTCTGGTTGTTGAAGCAAAGAAACAAAGCTTTTCCACGTTTGATGAATTGCTTGATAATGCTGACAAGCCTGTATTAGTTGACTTCTATGCTACATGGTGTGGTCCTTGTCAGTTTATGGTTCCCATACTCAATGAAGTAAGCACTCGGCTTAATGATAAGATACAGGTTGTAAAGATTGATACTGAGAAGTATCCCTCTATCGCTAACAAATACGATGTTCAGGCATTGCCTACTTTCATCATTTTTAAGGATGGAGAGCCCTATGATCGCTTTGAGGGAGCAATGACTGCAGATCAGCTTATTGAACGCATTGAAACCACTCTCAAAGAGGGAACAATGGCTGCAGATCAGCTTATTGAACGCATCGAAACCAGTCTCAAAGTTAAGCAATAA 576 0.4132 MAFSISASSTLVSFNSQRSTLLVATSSSSTKLYSFSSIQFPVHTQLLQIPISSSSRPRILPLVVEAKKQSFSTFDELLDNADKPVLVDFYATWCGPCQFMVPILNEVSTRLNDKIQVVKIDTEKYPSIANKYDVQALPTFIIFKDGEPYDRFEGAMTADQLIERIETTLKEGTMAADQLIERIETSLKVKQ 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0072 191 PANTHER GEO12009P1 24 169 - -
Lal13g0072 191 TIGRFAM thioredoxin: thioredoxin 71 167 IPR005746 GO:0015035
Lal13g0072 191 SUPERFAMILY Thioredoxin-like 70 171 IPR036249 -
Lal13g0072 191 ProSiteProfiles Thioredoxin domain profile. 49 170 IPR013766 -
Lal13g0072 191 ProSitePatterns Thioredoxin family active site. 86 104 IPR017937 -
Lal13g0072 191 PRINTS Thioredoxin family signature 85 93 - -
Lal13g0072 191 PRINTS Thioredoxin family signature 93 102 - -
Lal13g0072 191 PRINTS Thioredoxin family signature 133 144 - -
Lal13g0072 191 PANTHER THIOREDOXIN Y2, CHLOROPLASTIC 24 169 - -
Lal13g0072 191 CDD TRX_family 72 166 - -
Lal13g0072 191 Pfam Thioredoxin 70 166 IPR013766 -
Lal13g0072 191 Gene3D Glutaredoxin 63 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0072 Lal-Chr13 463007 466441 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0072 - - gmx:100500683 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0072 13 463007 466441 Lal13g0072 13 463007 466441 ECH