Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0064 ATGCATGCTCATGTTTCAGTTCCTATATATGTAATTGAACAGTTTAATTGCAAGTCAAGAATGGAACACTGTCAAATTGAAGAATATGGCATATCTGAAGTTCCATCACTAATTAAGTATATTTCATCAAATGAAGTAACTGGCTTTTATGTTAGTGACCTTCAATATCCCTGCCTATCTTCAATAAAAAGTGAAATACCCTCAGCAGAAGGCCAAGTTGATGAACCTGTGACCATCAATCATCAAAAGAAGCATTTGGTATCTATCAACATGCCACTCTCTTGTGAAGAGGTTCAGCCACATAACAGCATTAAAGTTCTCTGTAGTGGTGAAACTGATTTGAGAGATGGTATTCCCATATCCTCTTCTCAAATTAGTACTGAAGACTCAAAGCATCCATTGCCATCAAAAAACAGTGAGGTGCACCTAGAGGCAATTAGTGGTGATAACTTTGCCAATCATCAAAGTGGAAGGTATTCCCATATCCTCTTCTCAAATAACAGATTTGACTCTTTCAAAACATGGTCAGGCAAACTTGAGAAACAATTATCAATTCTAAGTGGAAGGTCACCTACACAAACTGTACAAGAGGACTGCAGCATAAGGAACACCGATAGGCCTTTACCTGTTCATCGCTACTTTGATGCATTGGAAGGTCCTGAGTTAGAAACTCTTAGGGCTTCAGAAGAGATAGTGTTTCCTCTAGACAACCAGTGGCCATTTCCTCTTCGGTTTCCGATATCATCATTTGGTATTTGTCTTGGAGTTAGCAGTCAAGCAATTCTTTGGAAAGCACTGGCCTTGTCTCCTTCCACTGAATTTCTTCACATAAGTTTGAAAATAAATTTTATCTTATGGTTCATCTCCATCGCTCTTACCACTACTATTTTCACTATATATCTTCTCAAAATCATTCTCTACTTCGAAGCTGTTCGTTGCGAGTATCATCACCCAATCCGTGTTAACTTCTTCTTTGCCCCTTGGATAGCACTCCTGTTCTTAGCTCTTGGTGCTCCCCCATCACTTACGAAAAACTTGCATCATGCACTTTGGTACATTCTAATGGTTCCACTAGTCTGTCTTGAGCTCAAAATCTATGGACAGTGGATGTCTGGGGGACAAAGGAGGCTTTCAAAGGTGGCAAATCCATCAAATCATCTTTCAATTGTTGGAAATTTTGTAGGAGCATTACTAGGTGCATCTATGGGTCTTAAAGAAGGGCCTATGTTCTTCTTTGCTGTTGGTTTTGCTCACTACATAGTCTTGTTTGTAACTCTCTATCAGAGACTTCCAACAAATGAGACCCTACCAAAAGATCTCCATCCAGTATTCTTTCTGTTTGTGGCAGCACCTAGTGTTGCTTCTGTGGCATGGGCTAGAATTCAGGGTTCTTTTGATTATAGGTCACGGATTGCCTATTTTATTGCCATGTTCCTTTATTTCTCACTGGCTATCCGGGTCAATTTTTTCAGAGGATTCAAATTCTCACTTTCATGGTGGGCCTACACTTTTCCAATGACTGGTGCAGCAATTGCAACCATAAACTACTCAAATCAAGTCACAAATGTTATGACAAAGGCTTTGTCTACAATGCTGAGTCTCACTTCCTCACTCATAGTGACAGCACTTCTTTGCTCAACTATATTGCATGCCTTTGTCCTCCGAGACCTCTTCCCCAATGACCTTGCCATTGCCATAAGTAATAGAAAGCGAAAACCAAATAAGAAGGGGTTCCAACTAAGACATGGTCATGCTAAAGAGATTGAAAATTACTTGAAGTTTGTTAACTCGGATAAACATGATTTAGAAGCTAGTGTAACTATTACACCCTCCTTCAAATGA 1842 0.3963 MHAHVSVPIYVIEQFNCKSRMEHCQIEEYGISEVPSLIKYISSNEVTGFYVSDLQYPCLSSIKSEIPSAEGQVDEPVTINHQKKHLVSINMPLSCEEVQPHNSIKVLCSGETDLRDGIPISSSQISTEDSKHPLPSKNSEVHLEAISGDNFANHQSGRYSHILFSNNRFDSFKTWSGKLEKQLSILSGRSPTQTVQEDCSIRNTDRPLPVHRYFDALEGPELETLRASEEIVFPLDNQWPFPLRFPISSFGICLGVSSQAILWKALALSPSTEFLHISLKINFILWFISIALTTTIFTIYLLKIILYFEAVRCEYHHPIRVNFFFAPWIALLFLALGAPPSLTKNLHHALWYILMVPLVCLELKIYGQWMSGGQRRLSKVANPSNHLSIVGNFVGALLGASMGLKEGPMFFFAVGFAHYIVLFVTLYQRLPTNETLPKDLHPVFFLFVAAPSVASVAWARIQGSFDYRSRIAYFIAMFLYFSLAIRVNFFRGFKFSLSWWAYTFPMTGAAIATINYSNQVTNVMTKALSTMLSLTSSLIVTALLCSTILHAFVLRDLFPNDLAIAISNRKRKPNKKGFQLRHGHAKEIENYLKFVNSDKHDLEASVTITPSFK 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0064 613 PANTHER S-TYPE ANION CHANNEL SLAH3 29 602 - -
Lal13g0064 613 CDD TDT_SLAC1_like 244 547 - -
Lal13g0064 613 Pfam Voltage-dependent anion channel 245 548 IPR004695 GO:0016021|GO:0055085
Lal13g0064 613 PANTHER - 29 602 IPR030183 GO:0006873|GO:0008308|GO:0016021
Lal13g0064 613 Gene3D - 241 558 IPR038665 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0064 Lal-Chr13 391786 396379 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0064 - - gmx:100816556 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0064 13 391786 396379 Lal13g0064 13 391786 396379 ECH
Lal2g0967 2 6501531 6504732 Lal13g0064 13 391786 396379 PCT
Lal9g0852 9 6275028 6279088 Lal13g0064 13 391786 396379 PCT
Lal13g0064 13 391786 396379 Lal2g0967 2 6501531 6504732 PCT
Lal13g0064 13 391786 396379 Lal9g0852 9 6275028 6279088 PCT