Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0050 ATGGATTCGCCTGAAAAGGTAGTTTTTGTGGATGAGGAGGATTGGGATTTAAGTGATAGTAAGAAGCATAGGTCAAGGAAATATGGTGAAGATGCTTCTGATGGAAGTGGAAGAAGAATAACCTATACTGATAATAATAATATTAATACAAGTGATACTAGGAAAAGATCTAGTGGATCGAGCCGGGCCGATAGTGATGATAATAATGATTATGAGTCACGGAAAGAGTTGCGCTCCAAACAGATGATGAGGAAGAGGCAAGAGGAGAGCGAGCTGGAGAAGTTGAGCAGTTGGTATGAGGATGGAGAGTTGGATAATAATGGAGATAAGACTGGGAGGAAGACTTCCTCCTCCTCCAAGCATTTGGACCATGATGCTTCTCAGAATAGGAGTCGAAGTAAAGATGATAGACTGCGTGATGCTGATGTTGAGAAGGATTATAAATACGTGGACAAGAGTGAAAGCAGTCGAGAGAAGGGTCATGGGTCTTCTGAACAGGTCAGGAGTTCAAGGAGGAGATGGGATGAGACCGATCCTGTAAAGATGAATGAAGACAGTTTTTCTGAGAAAGATATCAGAAGCGGTGGTAAAGCTTCTGATGTTAAGAGGGAGAGTTCTAGAGAGAGGAATGGATCTGCAAGAAATGAACATAGTGAGATTAAAAGCAAGGTAGTGGATTCCACCGGTGAGAAGGTTGTCAAATCAAATAGTAGAGAAGATAGAAGAGCTGATTCTGACAGAGGTAAGAGTAAAGGCAGCAAGTCAGAGATGCTAGATGCTGGTCGTGAAGATAACAAACTGGACAAGGATAGAATTGATCGTGAAGATAATAAGCAGGACAGGGACAGAATCGAGAAGACTAGGCGCCAGAGAACGCCCACAGGTTATGATGCTGCTGAAAGCTGGGATAGGCCATTAAATGCAGATGAGGATGGAAATATGCGTATTAGGGATAAGACTACTAGAGAACCTGGGAACACTAACAGATCTAGGACACCTGAGAGGAGTGGAAAACACCAGCAAGATTCAGAAAACTCAGATATGGATTATGATAGAAGTGGTAGCTTTAAAAGGAAGGAAAATGAAAACGATCTCTATAAGGATGATAGATCCAAGGGAATAGATGACACTTTGAATGACAGAAAGAAGGACCGAGAAAGTTCTAAAGAAAGTTGGAAAAGGAGGCAACCCAGTAGTTTTGACAGAGATTCAAAAGGTGATGACAGTGCCTTGGATCACAACAGAGATTGGGAGTTGCCTAGGCATGGTTATGACAGGATTGACAATGAAAGGCCTCATGGTCGAGCTGGATGTAGAAAAGATATAATCAGGGGGGATGCTGTTAAAGCAACATCAAACTTTGGAATTTCAAATGCCAATTATGATGTTATAGAGATCCAACTTAACAACCACGGGAAAACAGATTCTATACCCAACCTTGCCAGAAAAACTGAAGCTAATCAACAGTACAATGTGAAATCAGGTGGAAATGATGAAGAATGGGCATATCGTCAGCAAGAAAGATCAAGAAAGAATGACTCATCTGGTTCCGGGTTACCCAGTGAAGATCTGAAGGAGAGATACGGAGATGATGACTATGATTTTCATGGGGGAAGAGGAAGAGGTCATAAAGGCGTTGTATCTGGTCGTAGTGCTGGTAGTCAAAGTTCTAGTAGTGGTGGTTCACAGCCTCAATATGGAAACATGGAATCTGGATCCTTTAGCAGAGCTGGTCCACAAGGAATGAAAGGGAACAGGGTTGGCAGAGGAGGAAGGATCAGGCCTACTGGAAGAGACAACCAGCAGGTTGGAATGCCATTGCCGATGATGGGGTCACCCTATGGACCCCTTGGCCTGCCTCCTCCCGGGCCAATGCAGCCTCTTAACCATGGCATGTCGCCTGCTCCAGGTCCACCAATGTCCCCTGGAGTCTTCATTTCTCCATTTCCTCCAGCTATTTGGCCTGGAGCTCGAGGCGTTGATATGAATATAATGGGTGTTCCGCCTGCAGTCTCTCCTGTAACCCCAGGACCGTCAGGCCCAAGGTTTAATGCTCCTAACATATGCAACCCATCAAATCCTGCAATGTATTATAACCAATCAGGCCCTGGAAGGGGAATTCCCTTGAGCATTTCTAGTCCTGGTTTTAATCCTGCAGGACCAATGGCTCGAGTTACACCATCTGACAAACCTCAAGGGGGGTGGGTTCCTCCTAAAGGTGGAACTCATGGTAAAGCTCCTTCCAGAGGTGAACAAAATGATTATTCTCAAAACTTTGTTGACACCGGTATGCGGCCACAGAATTTTATTAGGGAGCTTGAACTCACAAGTGTTGTAGAGGACTACCCTAAGCTCAGGGAGCTTATAACAAAAAAAGATGAGATCGTGACAAAGTCTGCTTCTGCTCCTATGTATTATAAATGTGATCTGAATGAGTTTGAACTGTCTCCAGAGTTCTTTGGAACAAAGTTCGATGTCATTCTTGTAGATCCCCCATGGGAAGAGTATGTGCACCGCGCCCCTGGTGTTGCTGACCATATGGATTACTGGACATTTGAAGAAATTATGAATCTCAAGATTGAGGCTATAGCGGATACGCCTTCTTTCATCTTCCTTTGGGTGGGTGATGGTGTAGGCCTTGAACAAGGCCGTCAATGTCTAAAGAAGTGGGGATTTCGTAGGTGTGAAGATATATGTTGGGTAAAGACAAACAAAAGTAACGCAACTCCAGGACTGCGACATGATTCACATACTTTATTTCAACATTCAAAGGAACATTGCTTGATGGGCATAAAAGGGACTGTTCGTCGAAGTACTGATGGCCATATAATTCATGCTAACATTGACACAGATGTAATTATTGCTGAAGAACCTCCTTATGGTTCAACACAAAAGCCTGAAGATATGTATAGGATTATTGAGCACTTTGCTCTTGGGAGGAGGAGGCTTGAACTATTTGGCGAAGACCACAATATACGAGCTGGGTGGCTGACTGTTGGTAAAGAGCTTTCATCATCAAATTTTAATAAAGAGGCATATATCAAGACTTTTGCTGACAAGGATGGGAAAGTTTGGCAGGGAGGTGGAGGACGAAATCCACCTCCTGAGGCACCTCATCTTGTGGTCACTACACCTGATATAGAGGCTCTTAGACCCAAGTCACCAATGAAGAACCAGCAACAAATGCAGCAGCAGCAATCAGTATCCATTTCCTTGACGACACCGACCGTCTCAAACAGAAGGGCTGCCGGGAATTCACCACAGAATCCAGCTGCACATGGTGCTAACCAAGATGGTTCTAGCTCAAACCCTTCCACGCCAGCTCCTTGGGGTGAAGGCTTTAAGGGACGTGAAGGCTCTGCATTGCCTTCAGATGATAAGGTTATTGATATGTATGGGTTTCATGGACCTGCAACAACAAGCTATCTGGATTTTGAATCATACAGACAAATGAATATGTTGTAG 3465 0.441 MDSPEKVVFVDEEDWDLSDSKKHRSRKYGEDASDGSGRRITYTDNNNINTSDTRKRSSGSSRADSDDNNDYESRKELRSKQMMRKRQEESELEKLSSWYEDGELDNNGDKTGRKTSSSSKHLDHDASQNRSRSKDDRLRDADVEKDYKYVDKSESSREKGHGSSEQVRSSRRRWDETDPVKMNEDSFSEKDIRSGGKASDVKRESSRERNGSARNEHSEIKSKVVDSTGEKVVKSNSREDRRADSDRGKSKGSKSEMLDAGREDNKLDKDRIDREDNKQDRDRIEKTRRQRTPTGYDAAESWDRPLNADEDGNMRIRDKTTREPGNTNRSRTPERSGKHQQDSENSDMDYDRSGSFKRKENENDLYKDDRSKGIDDTLNDRKKDRESSKESWKRRQPSSFDRDSKGDDSALDHNRDWELPRHGYDRIDNERPHGRAGCRKDIIRGDAVKATSNFGISNANYDVIEIQLNNHGKTDSIPNLARKTEANQQYNVKSGGNDEEWAYRQQERSRKNDSSGSGLPSEDLKERYGDDDYDFHGGRGRGHKGVVSGRSAGSQSSSSGGSQPQYGNMESGSFSRAGPQGMKGNRVGRGGRIRPTGRDNQQVGMPLPMMGSPYGPLGLPPPGPMQPLNHGMSPAPGPPMSPGVFISPFPPAIWPGARGVDMNIMGVPPAVSPVTPGPSGPRFNAPNICNPSNPAMYYNQSGPGRGIPLSISSPGFNPAGPMARVTPSDKPQGGWVPPKGGTHGKAPSRGEQNDYSQNFVDTGMRPQNFIRELELTSVVEDYPKLRELITKKDEIVTKSASAPMYYKCDLNEFELSPEFFGTKFDVILVDPPWEEYVHRAPGVADHMDYWTFEEIMNLKIEAIADTPSFIFLWVGDGVGLEQGRQCLKKWGFRRCEDICWVKTNKSNATPGLRHDSHTLFQHSKEHCLMGIKGTVRRSTDGHIIHANIDTDVIIAEEPPYGSTQKPEDMYRIIEHFALGRRRLELFGEDHNIRAGWLTVGKELSSSNFNKEAYIKTFADKDGKVWQGGGGRNPPPEAPHLVVTTPDIEALRPKSPMKNQQQMQQQQSVSISLTTPTVSNRRAAGNSPQNPAAHGANQDGSSSNPSTPAPWGEGFKGREGSALPSDDKVIDMYGFHGPATTSYLDFESYRQMNML 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0050 1154 PANTHER N6-ADENOSINE-METHYLTRANSFERASE SUBUNIT METTL14 12 180 - -
Lal13g0050 1154 PANTHER N6-ADENOSINE-METHYLTRANSFERASE SUBUNIT METTL14 170 1154 - -
Lal13g0050 1154 MobiDBLite consensus disorder prediction 1078 1124 - -
Lal13g0050 1154 MobiDBLite consensus disorder prediction 725 752 - -
Lal13g0050 1154 Coils Coil 1154 1154 - -
Lal13g0050 1154 MobiDBLite consensus disorder prediction 487 607 - -
Lal13g0050 1154 MobiDBLite consensus disorder prediction 38 56 - -
Lal13g0050 1154 ProSitePatterns N-6 Adenine-specific DNA methylases signature. 827 833 IPR002052 GO:0003676|GO:0008168|GO:0032259
Lal13g0050 1154 ProSiteProfiles MT-A70-like family profile. 783 1022 IPR007757 -
Lal13g0050 1154 ProSiteProfiles mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase-like (MT-A70-like) family profile. 598 1061 - -
Lal13g0050 1154 MobiDBLite consensus disorder prediction 57 293 - -
Lal13g0050 1154 PANTHER N6-ADENOSINE-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT 170 1154 IPR045123 -
Lal13g0050 1154 PANTHER N6-ADENOSINE-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT 12 180 IPR045123 -
Lal13g0050 1154 MobiDBLite consensus disorder prediction 303 437 - -
Lal13g0050 1154 MobiDBLite consensus disorder prediction 549 575 - -
Lal13g0050 1154 MobiDBLite consensus disorder prediction 1078 1108 - -
Lal13g0050 1154 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 819 972 IPR029063 -
Lal13g0050 1154 MobiDBLite consensus disorder prediction 1 437 - -
Lal13g0050 1154 MobiDBLite consensus disorder prediction 523 541 - -
Lal13g0050 1154 Pfam MT-A70 824 1002 IPR007757 -
Lal13g0050 1154 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0050 Lal-Chr13 328669 335321 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0050 K23960 - gmx:100798100 1571.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0050 13 328669 335321 Lal13g0050 13 328669 335321 ECH
Lal13g0050 13 328669 335321 Lal24g0053 24 331862 337639 LSH