Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0049 CAACTTTGGCATGCTTTATTGGTGTCTCTATTAAAGCATCTTGGTGTCTCTACTAAATCAAAACCTCTTCTTTTTCATAGACATACAAAGGGTAAAGTGGTCTATGCATCTCTCTTTGGTGTTGGAGCCCCTGAAGCACTTGTCATTGGGGTTGTTGCTTTGTTGGTTTTTGGTCCTAAAGGTCTTGCTGAGGTTGCTCGAAATCTTGGGAAAACATTGCGGTCATTTCAGCCCACCATTAGAGAGCTTCAGGATGTTTCAAGGGAATTTAAGAGTACACTTGAACGGGAGATTGGTCTCGATGACATTTCAAGTTCAACACAGAACATGTACAATTCCAATGCACGCAATACCACATCAACTCCATCATCCTCAGCTAGTACCAACAGTTCTCAGATTGCTAAACGTACTTTACTAGATGGCACTCAAGATCCAAGAAAAGCATACAGCTCTGAGGAATATCTAAAGGTTACAGAGCAGCAGCTAAAGGCAGCTTCTGCTCAACAGCAAGGTCAGATACCCACTCCTAAAGAAGCCCCTGCTAAGGAAACGGCTACTACTGTGCCGCCACCTCAGAAGCCACAAAGTGAGACTTTACCACTGGATTCATAG 612 0.4363 QLWHALLVSLLKHLGVSTKSKPLLFHRHTKGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRSFQPTIRELQDVSREFKSTLEREIGLDDISSSTQNMYNSNARNTTSTPSSSASTNSSQIAKRTLLDGTQDPRKAYSSEEYLKVTEQQLKAASAQQQGQIPTPKEAPAKETATTVPPPQKPQSETLPLDS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0049 203 Gene3D - 38 96 - -
Lal13g0049 203 MobiDBLite consensus disorder prediction 160 203 - -
Lal13g0049 203 Pfam mttA/Hcf106 family 41 91 IPR003369 GO:0015031
Lal13g0049 203 TIGRFAM tatAE: twin arginine-targeting protein translocase, TatA/E family 40 85 IPR006312 GO:0016021|GO:0043953
Lal13g0049 203 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATB, CHLOROPLASTIC 10 197 - -
Lal13g0049 203 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC 10 197 - -
Lal13g0049 203 PRINTS Bacterial sec-independent translocation TatB protein signature 38 58 - -
Lal13g0049 203 PRINTS Bacterial sec-independent translocation TatB protein signature 58 77 - -
Lal13g0049 203 MobiDBLite consensus disorder prediction 105 145 - -
Lal13g0049 203 MobiDBLite consensus disorder prediction 160 175 - -
Lal13g0049 203 MobiDBLite consensus disorder prediction 188 203 - -
Lal13g0049 203 MobiDBLite consensus disorder prediction 105 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0049 Lal-Chr13 325757 329333 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0049 - - ccaj:109806043 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0049 13 325757 329333 Lal13g0049 13 325757 329333 ECH
Lal12g0060 12 397206 401331 Lal13g0049 13 325757 329333 LSH