Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0046 ATGTCAATGTTGTGTGGTGTGCCTATTGTTGTTGAGTGTGTGTACTGTCTGGGTTGTGCTAGTTGGGCATGGAAGAGATGTCTTTTTTCTGGAAGCCATGACAGTGAGACTTGGGGCATTGCCAATGCAGAAGAATTTGAGCCTGTCCCTCGCTTTTGTCGCTATATACTAGCTGTGTATGAAGATGATATTCGAAACCCGCATTGGGAACCCCCTGGAGGATATGGAATCAACACTGATTGGTTAATAATCAAAAGGACATACAAAGATACACAAGGGAGAGCCCCACCATACTTACTCTATCTCGATCATGATCATGCTGATATAGTTTTTGCTATTAGGGGTCTCAATTTGAAGAGGGAGAGTGACTATGCGGTTCTGTTGGATAATAGTTTGGGGAAGAGAAAGTTCGATGGAGGGTATGTTCACAATGGGCTTTTGAAAGCAGCTGCATGGGTTTTGGATTCTGAATGTGAAATTTTGAGGGAATTGGTGGAGAAGCATCCTAACTATACTCTCACTTTTGCTGGACATTCCCTTGGATCAGGAGTAGCAGCAATGTTGAGCATGGTGGTGGTTCAGAATAGAGAGAAACTCGGAAATATTGAGAGGAAGAGGGTCAGGTGCTATGCTATTGCACCCACTAGGTGCATGTCGCTTAATTTGGCAGTCAGATATGCAGATGTCATCAACTCTGTTGTGCTTCAGTTAACTGCTCTTTTCCTTGATCAGGATGACTTCTTGCCAAGGACATCCACTCCATTGGAAGATATATTCGAGTCTATTTTCTGTTTGCCATGCTTATTGTGCTTAAGGTGCATGCGGGATACGTGTATACCGGAAGAGGAGATGCTGAAAGATCCAAGGAGACTCTATGCACCCGGTCGCCTTTATCACATTGTTGACAGAAAACCTTTCAGAATAGGAAGGTTTTCCCCAGTTGTGAGGACAGCAGTGCCAGTAGATGGAAGGTTTGAGCATATAGTCTTTTCATGCAATGCCACAGCTGATCACGCCATCATTTGGATACACAAAGAATCCCAAAAGGCTCTGGAACTGATGCGTGAGAAGGATGATAATAATAGCATGGAAATCCCTGCAAAGCAAAGAATGGAGCGAGAAGAAACATTAGCTAGACACTGTGATGAATACAAAGCAGCATTAGAAAGGGCAAAGACATTAGATGTTTATACAGCACCATCACAATATGGAACCTTTCATGATGAAGGACAAGAGAGTCCGACAACATCTCACTCTGACTCTCCTTCTTTAATGAACAATGAAACATGGGATCAATTGATTGAACGATGTTTTCATAAGGATGAGATCACCAAATAA 1338 0.4283 MSMLCGVPIVVECVYCLGCASWAWKRCLFSGSHDSETWGIANAEEFEPVPRFCRYILAVYEDDIRNPHWEPPGGYGINTDWLIIKRTYKDTQGRAPPYLLYLDHDHADIVFAIRGLNLKRESDYAVLLDNSLGKRKFDGGYVHNGLLKAAAWVLDSECEILRELVEKHPNYTLTFAGHSLGSGVAAMLSMVVVQNREKLGNIERKRVRCYAIAPTRCMSLNLAVRYADVINSVVLQLTALFLDQDDFLPRTSTPLEDIFESIFCLPCLLCLRCMRDTCIPEEEMLKDPRRLYAPGRLYHIVDRKPFRIGRFSPVVRTAVPVDGRFEHIVFSCNATADHAIIWIHKESQKALELMREKDDNNSMEIPAKQRMEREETLARHCDEYKAALERAKTLDVYTAPSQYGTFHDEGQESPTTSHSDSPSLMNNETWDQLIERCFHKDEITK 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0046 445 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 443 - -
Lal13g0046 445 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 443 - -
Lal13g0046 445 Pfam Lipase 3 N-terminal region 11 75 IPR005592 GO:0016042
Lal13g0046 445 SUPERFAMILY alpha/beta-Hydrolases 42 278 IPR029058 -
Lal13g0046 445 CDD Lipase_3 45 261 - -
Lal13g0046 445 Pfam Lipase (class 3) 110 252 IPR002921 GO:0006629
Lal13g0046 445 MobiDBLite consensus disorder prediction 402 425 - -
Lal13g0046 445 Gene3D alpha/beta hydrolase 38 257 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0046 Lal-Chr13 307718 310044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0046 1 442 Miscellaneous Gene Families AT3G49050 65.612 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0046 - - mtr:MTR_1g100950 714.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0046 13 307718 310044 Lal13g0046 13 307718 310044 ECH