Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0029 ATGATGGGCGGTGGTGATTCAACTCCCCCACCACCCTACCAACCCATCTCCAAATCCTCCACCACCACCACCACCTCTTCTTCTTCATTTTCCCTCCGTAAATCCTTCCTCCTCCTCCTCTTCCTCTCCCTCTTCTCTTATCTCCTCGGTGCTTATCATAACGGTGTCCGCTTCACCTCCCTTTTTAAAACTAACAAAATCCCCAGTCTACCTCTATGCACCTTTAACCGTAACACCACCACCGCCACCACCGCCGTCGATTTCAACGATACCGCCCCAATCCCGAGATGCAGTGTCAACTACACTGAGTACACGCCCTGCGAGGACCCAATAAGGTCGACGAGGTACAAACGTAGCAGGATGATATATAGGGAGAGGCATTGCCCTAAGGAAAAATGGGAAGCCTTGAAGTGTAGGATACCTGCACCCTACGGTTATCGTAATCCTTTTCCTTGGCCGACTAGTAGGGACGTGGCGTGGTATGCGAATGTGCCCCACCGAGAGCTGACGGTGGAGAAGGCGGTTCAGAATTGGGTTCAGTATGAGGGTGATAGGTTCAGGTTTCCCGGCGGCGGAACCATGTTTCCAAACGGCGCAGGTGCTTACATTGATGATATCGGAAAGTTGATAAATCTCAAAGATGGCTCCATCAGGACTGCCCTTGACACTGGCTGTGGGGTTGCTAGTTGGGGAGCTTATCTACTTTCCCATGATGTGTTAACAATGTCAATAGCACCAAGGGATACACATGAAGCACAAGTTCAATTTGCACTTGAGAGAGGAGTTCCTGCAATCATTGGTGTCCTTGCCTCCAAGAGGTTACCTTTCCCTTCAAGAGCTTTTGATATCTCCCACTGCTCTCGTTGCCTCATCCCATGGGCTCAACATGATGGGATATTTCTAAATGAAGTTGATAGAGTTCTGCGCCCTGGCGGGTATTGGATTCTATCAGGGCCACCTATCCACTGGAAGAAACATTGGAAAGGGTGGGCAAGAACAGAGAAGGATTTGAATGAAGAACAGATGAATATTGAGATGGTTGCTAAAAGCCTCTGCTGGAATAAGCTAGTTGAGAAGGATGATATTGCTATTTGGCAGAAACCAATAAACCATTTCAATTGCAAAAAGGCCCGCCCAATCTGCAACCCTCAAACCAATCCTGATATCGCCTGGTATACAGATTTGCAAACTTGTTTGAGTCCTATGCCTGAAGTGTCTAACAAAGAAGAAACAGCAGGTGGGGTATTGGATAATTGGCCTCGGAGACTAAAATCCACACCTCCAAGGATTTATACGGGGACCATAGAAGGGGTTACTTCTCAAACTTTCTCAAAAGATTATGAGCTTTGGAAGAAAAGGGTAACTCACTATAAGAAAGTGAACAATCAACTAGGAAAAGCAGGGAGATACCGTAACCTTTTAGACATGAATGCCAACTTTGGTGGATTTGCAGCTGCACTAATTGAGGATCCTGTTTGGGTCATGAATGTGGTTCCTGTCCATTCTAAGGTTAACTCACTTGGAGCAATATATGAACGGGGATTGATTGGAACATATCATGACTGGTGTGAAGCAATGTCTACCTATCCTAGAACTTATGATCTAATTCATGCAGATTCAGTTTTCAGCCTTTACAGTGGCAGATGTGAATTGGAAGACATTTTGGTAGAAATGGATAGGATTCTTAGACCTGAAGGAAGTGTTATCATTCGTGATGATGTTGATATGTTACTAAAAGTAAAAAGCATAGTCAATGGATTGGAGTGGGAAAGTCAAATTGTTGAACATGAAGATGGGTCTCTTCAACGGCAAAAAATTCTATTTGCTGTCAAGAAATATTGGACAGCCCCCGCTGATTCCAACAACCTTAGTTAG 1875 0.4528 MMGGGDSTPPPPYQPISKSSTTTTTSSSSFSLRKSFLLLLFLSLFSYLLGAYHNGVRFTSLFKTNKIPSLPLCTFNRNTTTATTAVDFNDTAPIPRCSVNYTEYTPCEDPIRSTRYKRSRMIYRERHCPKEKWEALKCRIPAPYGYRNPFPWPTSRDVAWYANVPHRELTVEKAVQNWVQYEGDRFRFPGGGTMFPNGAGAYIDDIGKLINLKDGSIRTALDTGCGVASWGAYLLSHDVLTMSIAPRDTHEAQVQFALERGVPAIIGVLASKRLPFPSRAFDISHCSRCLIPWAQHDGIFLNEVDRVLRPGGYWILSGPPIHWKKHWKGWARTEKDLNEEQMNIEMVAKSLCWNKLVEKDDIAIWQKPINHFNCKKARPICNPQTNPDIAWYTDLQTCLSPMPEVSNKEETAGGVLDNWPRRLKSTPPRIYTGTIEGVTSQTFSKDYELWKKRVTHYKKVNNQLGKAGRYRNLLDMNANFGGFAAALIEDPVWVMNVVPVHSKVNSLGAIYERGLIGTYHDWCEAMSTYPRTYDLIHADSVFSLYSGRCELEDILVEMDRILRPEGSVIIRDDVDMLLKVKSIVNGLEWESQIVEHEDGSLQRQKILFAVKKYWTAPADSNNLS 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0029 624 Gene3D Vaccinia Virus protein VP39 190 358 IPR029063 -
Lal13g0029 624 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 32 618 IPR004159 GO:0008168
Lal13g0029 624 MobiDBLite consensus disorder prediction 1 27 - -
Lal13g0029 624 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 103 611 IPR004159 GO:0008168
Lal13g0029 624 PANTHER METHYLTRANSFERASE PMT20-RELATED 32 618 - -
Lal13g0029 624 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 458 575 IPR029063 -
Lal13g0029 624 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 334 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0029 Lal-Chr13 187414 191048 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0029 - - gmx:100777356 920.228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0029 13 187414 191048 Lal13g0029 13 187414 191048 ECH