Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0028 ATGCAATCACAGCGCCAAAATGAGGTCACACAAGTATGCCCTCAAGGTTGCTTCCCAACCTTAATGTTCAACTCATCATCGCCACAATCTCATAACATGACCAAGCCAAGAAACAGTTCTTCAGAGTGCCGTCACAACTTCGCAGCAACAACAACATCCTCTATCTTTCCAAACACTAAATTCACTAATCATGAGTCCCTTCCATCGCTTCAAGAATCACTGAACGAGTTCAACAAAGTGTACCCTCAATACCCAGAGACTGAACAAGTTGACAAAGTCAGAGCCAAAGAATATTACCATCTCTCTTTCTCCAATCATACTTGCCTTGATTATATTGGAATTGGCCTCTTTTCTTACTACCAACGCCAACAATTACAACACAATGATGCTTCAAAAACTCAACTTGCTTCTTCTTCAACACCTCCTCAATCTCCACAGGGATATTCAGATATTCCCTTCTTTAGCATAGCCTATAAGACAGGGAATCTGAAGACTTTATTGCTTCATGGGGATTATGAGTCAGGATTTGAGTCTGCAATGAGGAGAAGAATAATGAAGTTCCTTAACATTTCTGAAAATGATTACTTCATGGTATTCACTGCGAACAGAACAGCAGCTTTCAAACTGGTGGCTGATTCATATCCATTCCAATCTAGTGAAAAGCTTCTGACAGTTTATGACTATGAGAGTGAGGCAGTGGAAGCAATGATTAATTGCTCAGAGAAGAGAGGGGCAAGGGCTATGTCAGCAGAGTTCTCATGGCCAAGGCTCAGGATTCAGTCAACAAAGTTAAGGAAGATGATTGAGAGTAAGAGGAAGAAGAAAAGTAAGGGTCTTTTTGTGTTCCCACTTCATTCAAGAGTAACAGGAGCTAGATATCCCTATCTGTGGATGAGCAGAGCACATGAAAATGGGTGGCATGTGTTGATCGATGCTTGTGCATTGGGACCAAAAGACATGGACAGCTTTGGCCTCTCTCTCTTTCACCCTGACTTTCTCATTTGTTCTTTCTACAAGGTTTTTGGAGAAAGTCCATCTGGGTTTGGATGCCTGTTTGTCAAGAAATCTGCTATTTCCGTTCTGGAAGCTTCTTCTATTGCAGGAATTGTGAACCTTGTACCTGAAAAGAGGCTGCATCAGCAGTCGGAAGACTCTTCTGGTACTGATGTAGAAAATGAAAAAAAATCAGCAGCATCTAGCTTACAAGAAGATGAATTAGCTTCTTTGACTTCTTTCTCCGGAAGGTTACAAACCACACGGTTCGAAGGAGAAGGAAAACGAGAAATAGAGGCACCTGCGCTTCAAATCAGAGAGGTGCCTGCAGATATTTTGGGAACACAAAGGCCAGTTGAGAACCTTCAAGATAGTGAAACTGGGAGGTTTTACATTGAGTACAGGTGTTTGGATCAGGTGGACTCTTTAGGATTGAGAATGATCACAGACAGAGGTAGGTACCTGATAAACTGGCTGGTGAACTCAATGTTAAAACTTAAACACCCGAACACAGAAGGGGCTCCCCTAGTCAATATTTATGGCCCAAAGATAAAATTTGACAGGGGGGCTGCCTTGGCATTCAATGTGTTTGATTGGAAAGGTGAAAAGGTAGAGCCTGTTCTTGTACAAAAACTTGCTGATAGAAACAACATTTCTCTCAGCTATGGATTTCTGCATCATCTCTGGTTTGCAGATAAGTATGCAGAAAAGAAGGGAAGAGTTCTGCAGAGCAAAGAAGGAAAAGGCCAGGATGTGACTGTCAACAAAAAGAAAGAGAGAGATAACCTCGGTGTGACTGTGGTTACAGCTGCATTAAGCTTCCTGGCCAATTTTGAAGATGTATACAAATTGTGGGCTTTTGTTGCTCGGTTTCTTGATGCAGATTTTGTGGAGAAGGAGAGATGGAGATACACAGCTATCAATCAGAAAACAATTGAACTTTAA 1938 0.4174 MQSQRQNEVTQVCPQGCFPTLMFNSSSPQSHNMTKPRNSSSECRHNFAATTTSSIFPNTKFTNHESLPSLQESLNEFNKVYPQYPETEQVDKVRAKEYYHLSFSNHTCLDYIGIGLFSYYQRQQLQHNDASKTQLASSSTPPQSPQGYSDIPFFSIAYKTGNLKTLLLHGDYESGFESAMRRRIMKFLNISENDYFMVFTANRTAAFKLVADSYPFQSSEKLLTVYDYESEAVEAMINCSEKRGARAMSAEFSWPRLRIQSTKLRKMIESKRKKKSKGLFVFPLHSRVTGARYPYLWMSRAHENGWHVLIDACALGPKDMDSFGLSLFHPDFLICSFYKVFGESPSGFGCLFVKKSAISVLEASSIAGIVNLVPEKRLHQQSEDSSGTDVENEKKSAASSLQEDELASLTSFSGRLQTTRFEGEGKREIEAPALQIREVPADILGTQRPVENLQDSETGRFYIEYRCLDQVDSLGLRMITDRGRYLINWLVNSMLKLKHPNTEGAPLVNIYGPKIKFDRGAALAFNVFDWKGEKVEPVLVQKLADRNNISLSYGFLHHLWFADKYAEKKGRVLQSKEGKGQDVTVNKKKERDNLGVTVVTAALSFLANFEDVYKLWAFVARFLDADFVEKERWRYTAINQKTIEL 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0028 645 Pfam Aminotransferase class-V 179 369 IPR000192 -
Lal13g0028 645 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 7 645 - -
Lal13g0028 645 MobiDBLite consensus disorder prediction 378 405 - -
Lal13g0028 645 MobiDBLite consensus disorder prediction 378 400 - -
Lal13g0028 645 Gene3D - 170 393 IPR015421 GO:0003824
Lal13g0028 645 SUPERFAMILY PLP-dependent transferases 178 370 IPR015424 -
Lal13g0028 645 PANTHER MOLYBDENUM COFACTOR SULFURASE 7 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0028 Lal-Chr13 177011 178948 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0028 - - gmx:100820534 960.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0031 12 240826 242769 Lal13g0028 13 177011 178948 ECH
Lal13g0028 13 177011 178948 Lal13g0028 13 177011 178948 ECH
Lal12g0031 12 240826 242769 Lal13g0028 13 177011 178948 LSH