Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0017 ATGCTTCCTAAATCAGTTAATCCTCAAGCTCTTTCAGATACCAAATACTGTTTCTTTGTATCCCCATATAACCCTCGTCTATGGTTTCTCTTCATCCTCCTCACCCTACAGATCTTCTTCCTCTCCAACCTACCTTCCTTCCTCACCCAACACCATCACCAATGGCCTCACACCCTCCACCTCACCAACTACTCCATCCACGCTGGGACTCCTCCTCCTCCTCTACTCACTCCCAATTCCTTCAACCAATGTCCTCATGGCAAGGTTTTCGTTTATGACCTCCCCCCTTACTTCAATCGACACATTCTCCAAAGCTGTGACAACCTCAACCCTTGGACCTCCCGCTGTCATGCCCTCTCCAACGCTGCCATGGGGACCTCCGCCACATCTCTCGCGGGGGTCATTCCCGACGATCTCATCCCGGCGTGGTTCTGGACAGACCAGTTCGTCTCAGAGATCATCTTCCACAACCGCATCTTACACCATAACTGCACCGTCACTGACCCTCAATCCGCTACGGCCTTCTACATCCCCTTCTACGCTGGACTCGCTGTTGGAAAATATCTATGGACTAATTCCTCCACCGCACAGGACCGCGATCACCACTGCGACTTGTTGCTGACGTGGCTCAGCCAACAACCCTATTATCAAAAATCACACGGCTGGGATCACTTCATCACCATGGGACGCATCACATGGGATTTCCGACGCTCCAACAATTACGATTGGGGTTCTAGCTGCATCTATAAGCCACTCATGCGCAACATCACGCGCCTCCTCATTGAGAGAAACCCCTGGGACTACTTCGATGTCGCTGTTCCCTACCCCACCGGATTCCACCCCGCCTCCGTCTCCGACGTCATCCGCTGGCAGATCTTCGTCCGCGATCGCCGCCGCAGTGCTTTGTTCTGCTTCGCAGGAGCGCCGCGCAGAGAGTTCAATAATGATTTCAGGGGAATTTTGCTGAATCAGTGTCGCGATTCCGGCAATTCATGCCGCGCTGTGAATTGTTCCGGGAGCCGGTGTGCCAACGGCACGTCTGCGATCCTGGAAACGTTTCTGGACTCGGATTTCTGCTTGCAACCAAGGGGTGACAGCTTCACGCGGCGGTCGATTTTCGATTGCATGATAGCAGGTTCGATCCCGGTATTTTTCTGGCAGAGAAGCGCATACTTGCAATACGAATGGTTCTTGCCGTTAGAACCGGGGAGCTACTCGGTTTTCATAGACCGGAATGCGGTTAAGAATGGTACTTCAGTGAAAGAGGTGCTTGAGGGGTACAGGAAGGAAGATGTGAGGAAAATGAGGGAGAAAGTGATTGAATACATTCCAAGATTGGTTTATGCAAAGAATAACAATGGATTAGAGGGTATGAAGGATGCTTTCGATATTGCCATTGAAGGAGTCCTCAAAAGGTTTAAGGATCAACAAGATCCCACTTTCCACAAGTGGTGA 1455 0.512 MLPKSVNPQALSDTKYCFFVSPYNPRLWFLFILLTLQIFFLSNLPSFLTQHHHQWPHTLHLTNYSIHAGTPPPPLLTPNSFNQCPHGKVFVYDLPPYFNRHILQSCDNLNPWTSRCHALSNAAMGTSATSLAGVIPDDLIPAWFWTDQFVSEIIFHNRILHHNCTVTDPQSATAFYIPFYAGLAVGKYLWTNSSTAQDRDHHCDLLLTWLSQQPYYQKSHGWDHFITMGRITWDFRRSNNYDWGSSCIYKPLMRNITRLLIERNPWDYFDVAVPYPTGFHPASVSDVIRWQIFVRDRRRSALFCFAGAPRREFNNDFRGILLNQCRDSGNSCRAVNCSGSRCANGTSAILETFLDSDFCLQPRGDSFTRRSIFDCMIAGSIPVFFWQRSAYLQYEWFLPLEPGSYSVFIDRNAVKNGTSVKEVLEGYRKEDVRKMREKVIEYIPRLVYAKNNNGLEGMKDAFDIAIEGVLKRFKDQQDPTFHKW 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0017 484 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 18 478 IPR004263 GO:0006486|GO:0016757
Lal13g0017 484 Pfam Exostosin family 84 423 IPR040911 -
Lal13g0017 484 PANTHER XYLOGLUCAN GALACTOSYLTRANSFERASE XLT2 18 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0017 Lal-Chr13 120155 121609 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0017 - - gsj:114403132 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0017 13 120155 121609 Lal13g0017 13 120155 121609 ECH