Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1316 ATGGCGTTTTCTTCATCCATGGTTTCTTTGTTTATTCTTCTCATTTTATCTTTGCTTCAATTATCATCTTTCTCTTCTGGGTCTTCTTCCTCTTTGTGTCTTCCACAACCTTCTTCGTTTCTCTATAATCTTCAATCTCAGTGCCCATTTCTGATCCAATCTAATCCACCTTTTCAGGTGGATGGAAATTTCATAGAAGGAGTTTTGTCTAGGAGAAAGAGCATTGGATATATTTCTATACTCTTCTATGCTTCCTGGTGCCCATTTTCACGCAGAATGCTTCCTGAATTTGAAACTCTTAGTTCAATGTTTCCCGAAGTAGAACATTTGACTTTAGAACAATCATCAGCATTGCCAAGTTTATACTCAAAATATGGAATCCATAGCTTGCCTGCTATCTTTCTCGTGAACCGGACATCAAGAGTGAGATATCATGGTCCAAGCAATCTTCTCTCCCTTGTTGAATTTTATGAGAGAAACACTGGATTGGAATTGAGTGGTAGCATTGCTGTTGATCAACTAAGCAGCTTGGCTAGTGATGATAATTCATCTATGAAGTCATTGATGGGTTTATCTCTGAAAGAAATATCAAGCAGGGAACCTTACTTAGTATTCTCTGTATTGTTTCTCTGTTTGAGGATACTTCTTTTTGTATTTCCGAAGCTTGTATCGCGTCTTCGAGCATTCTGGGTTTCCTATATCCCTCATCTGAATATGCAAATATTTGGGGAGACGAGCCAAGTAATCGGACGCGTGCTTCATGCAATTGATGTCAGGAGGATTTGGACCAAGCTAAGACTATGCAAGACCAGGAGCTTTCACGAAAGGGCAAGAAGTGCTCGGGTATGGGCTTCGTCTCTGGCTTCGGTTTCTCTGGGCGAGTCATCATCGGCTAGGTCATCATCTCAAGGTTTGAACTAG 921 0.4061 MAFSSSMVSLFILLILSLLQLSSFSSGSSSSLCLPQPSSFLYNLQSQCPFLIQSNPPFQVDGNFIEGVLSRRKSIGYISILFYASWCPFSRRMLPEFETLSSMFPEVEHLTLEQSSALPSLYSKYGIHSLPAIFLVNRTSRVRYHGPSNLLSLVEFYERNTGLELSGSIAVDQLSSLASDDNSSMKSLMGLSLKEISSREPYLVFSVLFLCLRILLFVFPKLVSRLRAFWVSYIPHLNMQIFGETSQVIGRVLHAIDVRRIWTKLRLCKTRSFHERARSARVWASSLASVSLGESSSARSSSQGLN 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1316 306 Pfam Thioredoxin 77 156 IPR013766 -
Lal12g1316 306 ProSiteProfiles Thioredoxin domain profile. 49 162 IPR013766 -
Lal12g1316 306 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 7 6 302 - -
Lal12g1316 306 Gene3D Glutaredoxin 55 166 - -
Lal12g1316 306 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 7 6 302 IPR044794 -
Lal12g1316 306 SUPERFAMILY Thioredoxin-like 46 160 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1316 Lal-Chr12 16124526 16131866 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1316 - - aprc:113867833 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1316 12 16124526 16131866 Lal12g1316 12 16124526 16131866 ECH
Lal12g1316 12 16124526 16131866 Lal24g1229 24 13528751 13533778 LSH
Lal8g1025 8 8067848 8072937 Lal12g1316 12 16124526 16131866 PCT
Lal10g0451 10 10673581 10678228 Lal12g1316 12 16124526 16131866 PCT
Lal12g1316 12 16124526 16131866 Lal8g1025 8 8067848 8072937 PCT
Lal12g1316 12 16124526 16131866 Lal10g0451 10 10673581 10678228 PCT