Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal12g0867 | ATGGATGTATCTCAGTATATCATAAAAATATCAGCTTTAATATCTTCTGATTCAGTAAGATCTTCGAATGATAATACTCTTTTGAAACAGATGCTAGTATTGCCTGTGTTGGAACTTGCTTCAATATGTGTGAACCTGACCCTTGTTCTATTGTTTCTCTTTGTTGTCTCTGTTAGAAGCATTATTGTGTGTGAGGGTCGAATTCGAAGTCGTAATGGTAAAGAGAATAACTCTGGCAATGGAAATAATAGGAGCATTGATGTAGAAACATGTGATGTTCGAATCGGTGGAGTGTTCAAGTTGTCAGTGTTGTCTGGTTTCTATGTTCTGTTGGTTCAGGTTTTTGTGTTGGGGTTTGATGGGGGTGCTTTGATTTGGGGTGAGGCTAATGGGAAGGACAAAAAATCTGTGTACTTGTATGTTCTTATTGTGCCAGCTTCACAAGGTTTAGCTTGGTTTGTGTTAAGCTTCTCTACTTTGCATTGCAAATTCAAGGTGTCCGAAAAGTTCCCATTTCTGTTAAGAGTTTGGTGGGTTTTGTCATTTGTTATTTGCTTGTGTACTTTGTATGTTGATGGGAGAGGTTTTTGGGTTGAAGGTTATAAGCACTTACGTTCTCATGTTGTTGCTAATTTCGCTGTTACCCCAGCTCTTGCATTTTTGTGCATAGCAGCAATTAGGGGTGTTACTGGTATAGAAGTAATTTGTAGGAACTCTAATCTTTATGAGCCGTTCCTTGTTGAAGAAGAACCAGGTTGTCTTAAGGTTACTCCTTACCGGGATGCTGGATTTTTTAGCTTGGCTACTCTTTCTTGGTTGAATCCATTACTTTCGATCGGTGCGAAGAGACCACTTGAGCTTAAGGACATTCCTCTTGTTGCACCAAAGGATAGAGCCAAGGCTAGTTATAAGGTTTTGAACTCTAATTGGGAGAAGTTGAAGGCTGAGAATCCCTCTAAGCAGCCTTCATTAGCTTCGGCAATTCTTAAGTCATTCTGGAAAGAAGCAGCTGTGAATGCCATCTTTGCTGGTTTGAATACTTTGGTCTCATATGTAGGACCATACATGATAAGTTACTTTGTCGATTACTTGAGTGGTAAAGAGACTTTCCCTAACGAGGGGTATGTCCTCGCGGGTATATTCTTTGTCGCAAAGCTTGTGGAGACCCTGACAACTAGGCAGTGGTACCTAGGAGTTGACATTTTGGGTATGCATGTTCGGTCAGCTCTAACTGCAATGGTATACCGAAAGGGACTCCGACTCTCAAGCTCGGCAAAGCAAAGTCACACAAGTGGGGAGATTGTGAACTACATGGCTGTTGATGTTCAGAGAGTAGGGGACTACTCTTGGTATCTTCATGACATGTGGATGCTTCCCATGCAGATTGTTCTCGTCCTTTTGATTTTGTATAAGAATGTTGGAATTGCTTCCGTCGCAACTTTGATTGCTACAATCATTTCCATTGTCATCACCATTCCTGTGGCTAGGATGCAAGAAGATTATCAAGACAAATTGATGGCTGCTAAGGATGAAAGGATGAGAAAAACATCCGAGTGTCTCAGAAATATGAGGATTCTCAAACTGCAAGCTTGGGAACACAGATATCAACTACAATTGGAGGAAATGCGTGGTGTTGAGTACAAGTGGCTTCGGAAAGCCCTCTATTCTCAGGCTTGCATAACTTTCATGTTTTGGAGCTCACCGATATTTGTTTCAGCTGTCACTTTCGCTACTTCCATATTATTGGGAGGTCAGCTGACAGCTGGTGGTGTCCTTTCTGCTCTAGCTACTTTCAGGATCCTCCAAGAACCACTGAGAAGTTTTCCCGACTTGGTATCAATGATGGCTCAGACAAAAGTTTCTCTTGATCGCTTATCCAGTTTCCTGCAGGACGAAGAATTGCAGGGAGATGCAACAATCATCTTGCCACAAGGCACTTCCGACGTTGCCATAGAAATTAAGGACGGTGTCTTCTCCTGGGACCCTTCTCTGTCTAGGCCTACTCTATCAGGAGTACATATGAGAGCGGAAAGGGGGATGCATGTCGCTGTTTGTGGCACAGTTGGTTCTGGGAAATCAAGTTTTCTTTCTTGCATCCTTGGAGAGATTCCTAAGCTTTCCGGTGAAGTAAGGGTGTGTGGTTCTTCTGCGTATGTCTCCCAATCAGCATGGATACAGTCAGGGAATATAGAAGAAAATGTTCTCTTTGGAAGCCCAATGGACAAAGCAAAGTACAAGAATGTTCTACATGCTTGTTCATTGAAAAAGGACCTGAAGCTTTTCTCACACGGAGACCAAACGATTATTGGTGATAGAGGTATAAACCTGAGTGGTGGCCAGAAGCAGCGGGTTCAGCTTGCACGAGCACTCTACCAAGATGCTGATATTTATCTCCTTGATGATCCCTTCAGCGCACTTGATGCCCACACTGGATCAGAATTGTTTAGGGAATATGTATTGACAGCACTAGCAGATAAAACAGTCATTTTTGTGACCCATCAAGTTGAATTTCTTCCTGCTGCTGATATGATACTGGTTCTTAAGGAAGGGCACATCATACAAGCAGGAAAATATGATGATCTTTTGCAAGCAGGAACAGATTTTAGCATTCTAATTTCAGCTCACCATGAAGCAATAGAAGCTATGGACATTCCTACTCACTCTTCAGAAGACTCGGATGAAAATGTGCTCCTAGATATATCTGTTATGAACTGTAAGAATTCCATTTCTTCTGAAAATGATATTGACATTTTGGCAAAGGAGATGCAAGAGGGATCATCAGATCAGAAAGCAATTAAGGAGAAGAAGAAAGCGAAACGCTCGAGAAAAAAACAACTTGTTCAAGAAGAGGAGAGGGTTAGAGGTAAAGTCAACATGAAGGTGTACTTGTCGTACATGGCTTCAGCATACAAAGGCTTATTGATTCCTCTCATAATCATTGCGCAAACATTATTTCAGTTCCTTCAGATTGCCAGTAATTGGTGGATGGCTTGGGCAAATCCTCAAACTGAAGGAGACCAACCCAAAGTAAGTCCCTCGGTTCTTCTTCTTGTTTACATGGCCCTTGCTTTTGGCAGCTCGTGGTTTATATTCGTAAGGGCTATTTTGGTGGCTGCATTTGGTCTAGCTGCTTCACAGAAGCTATTTTTCAAGATGCTTAGAAGTATTTTCCATGCACCTATGTCTTTCTTTGACTCTACACCAGCTGGAAGGATCTTGAATCGCGTTTCTGTTGATCAAAGTGTTGTGGATCTTGATATTCCTTTTAGACTCGGTGGATTTGCTTCAACAACAATACAGCTTATTGGCATTGTTGCTGTAATGTCTGAAGTTACATGGCAAGTTTTACTCCTAGTTGTCCCAATGGCTGTTGCTTGTTTGTGGATGCAGAAATACTACATGTCTTCCTCAAGGGAACTGGTACGTATTGTAAGCATCCAGAAATCTCCAATTATAAATCTTTTTGGTGAATCAATTTCTGGAGCAGCTACCATCAGAGGTTTTGGACAAGAAAAAAGGTTCATGAAGAGAAACCTTTATCTTCTGGATGCTTTTGCACGACCCTTCTTTTGCAGTCTTGCAGCTATCGAGTGGCTCTGCCTGCGCATGGAATTACTTTCAACCTTTGTATTTGCTTTCTGTATGGTATTACTCGTGAGCGTTCCCCATGGGAGTATTGACCCCAGCATGGCTGGACTTGCTGTGACATATGGCCTGAATTTAAATGCACGTCTATCACGGTGGATACTTAGTTTTTGCAAACTTGAAAATAAAATTATATCTATTGAGAGAATATATCAGTACAGCCAAATTCCTAGTAAAGCACCAGCAGTTATTGAAGATTCACGCCCTCCATCCACATGGCCTGAGAATGGGACAATCCAAATTACCGATTTGAAGGTCCGTTACAAGGAAAGTCTTCCTCTGGTTCTTCATGGAGTATCCTGCACATTTCCTGGTGGGAAGAAGATTGGGATTGTTGGACGTACTGGCAGTGGTAAATCTACTTTGATTCAGGCATTATTTCGATTGGTTGAACCATCAACTGGGAGAATCCTTATAGACAACATCAATATATCGGGAATTGGTCTTCATGACCTTCGAAGCCATCTGAGTATCATACCACAAGATCCAGCATTGTTTGAAGGCACCATCCGAGGCAATCTCGATCCTCTTGAAGAGCACTCGGACAAAGAGATTTGGGAGGCACTAGACAAGTCTCAGCTTGGAGATATTATCCGTGAGAAAGAGCAAAAGCTTGATACACCAGTGCTAGAAAATGGAGATAATTGGAGCGTAGGACAGCGGCAACTTGTTTCTCTGGGCCGAGCTCTACTTAAGCAGTCGAAAATACTTGTACTTGATGAAGCAACAGCATCTGTTGACACTGCTACCGACAATCTTATCCAGAAGATTATTCGAGAAGAGTTCAGAGACTGCACTGTGTGCACCATTGCACACCGTATTCCTACTGTTATTGACAGTGATCTTGTTCTGGTACTCAGTTATGGTCGGGTAGCAGAGTATGACACTCCATCACGGCTATTAGAGGATAAGTCGTCCATGTTTCTGAAGTTGGTGACCGAGTATTCGTCGCGGTCAAGTGGCATACCTGATTTTTAA | 4623 | 0.422 | MDVSQYIIKISALISSDSVRSSNDNTLLKQMLVLPVLELASICVNLTLVLLFLFVVSVRSIIVCEGRIRSRNGKENNSGNGNNRSIDVETCDVRIGGVFKLSVLSGFYVLLVQVFVLGFDGGALIWGEANGKDKKSVYLYVLIVPASQGLAWFVLSFSTLHCKFKVSEKFPFLLRVWWVLSFVICLCTLYVDGRGFWVEGYKHLRSHVVANFAVTPALAFLCIAAIRGVTGIEVICRNSNLYEPFLVEEEPGCLKVTPYRDAGFFSLATLSWLNPLLSIGAKRPLELKDIPLVAPKDRAKASYKVLNSNWEKLKAENPSKQPSLASAILKSFWKEAAVNAIFAGLNTLVSYVGPYMISYFVDYLSGKETFPNEGYVLAGIFFVAKLVETLTTRQWYLGVDILGMHVRSALTAMVYRKGLRLSSSAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDMWMLPMQIVLVLLILYKNVGIASVATLIATIISIVITIPVARMQEDYQDKLMAAKDERMRKTSECLRNMRILKLQAWEHRYQLQLEEMRGVEYKWLRKALYSQACITFMFWSSPIFVSAVTFATSILLGGQLTAGGVLSALATFRILQEPLRSFPDLVSMMAQTKVSLDRLSSFLQDEELQGDATIILPQGTSDVAIEIKDGVFSWDPSLSRPTLSGVHMRAERGMHVAVCGTVGSGKSSFLSCILGEIPKLSGEVRVCGSSAYVSQSAWIQSGNIEENVLFGSPMDKAKYKNVLHACSLKKDLKLFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSALDAHTGSELFREYVLTALADKTVIFVTHQVEFLPAADMILVLKEGHIIQAGKYDDLLQAGTDFSILISAHHEAIEAMDIPTHSSEDSDENVLLDISVMNCKNSISSENDIDILAKEMQEGSSDQKAIKEKKKAKRSRKKQLVQEEERVRGKVNMKVYLSYMASAYKGLLIPLIIIAQTLFQFLQIASNWWMAWANPQTEGDQPKVSPSVLLLVYMALAFGSSWFIFVRAILVAAFGLAASQKLFFKMLRSIFHAPMSFFDSTPAGRILNRVSVDQSVVDLDIPFRLGGFASTTIQLIGIVAVMSEVTWQVLLLVVPMAVACLWMQKYYMSSSRELVRIVSIQKSPIINLFGESISGAATIRGFGQEKRFMKRNLYLLDAFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSVPHGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSKAPAVIEDSRPPSTWPENGTIQITDLKVRYKESLPLVLHGVSCTFPGGKKIGIVGRTGSGKSTLIQALFRLVEPSTGRILIDNINISGIGLHDLRSHLSIIPQDPALFEGTIRGNLDPLEEHSDKEIWEALDKSQLGDIIREKEQKLDTPVLENGDNWSVGQRQLVSLGRALLKQSKILVLDEATASVDTATDNLIQKIIREEFRDCTVCTIAHRIPTVIDSDLVLVLSYGRVAEYDTPSRLLEDKSSMFLKLVTEYSSRSSGIPDF | 1540 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal12g0867 | 1540 | SMART | AAA_5 | 678 | 859 | IPR003593 | - | |
Lal12g0867 | 1540 | SMART | AAA_5 | 1320 | 1505 | IPR003593 | - | |
Lal12g0867 | 1540 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1294 | 1528 | IPR003439 | GO:0005524 | |
Lal12g0867 | 1540 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 647 | 871 | IPR027417 | - | |
Lal12g0867 | 1540 | Gene3D | - | 646 | 878 | IPR027417 | - | |
Lal12g0867 | 1540 | Gene3D | ABC transporter type 1, transmembrane domain | 307 | 633 | IPR036640 | GO:0005524|GO:0016021 | |
Lal12g0867 | 1540 | Gene3D | ABC transporter type 1, transmembrane domain | 936 | 1275 | IPR036640 | GO:0005524|GO:0016021 | |
Lal12g0867 | 1540 | SUPERFAMILY | ABC transporter transmembrane region | 328 | 633 | IPR036640 | GO:0005524|GO:0016021 | |
Lal12g0867 | 1540 | CDD | ABC_6TM_ABCC_D2 | 975 | 1269 | IPR044726 | GO:0140359 | |
Lal12g0867 | 1540 | Coils | Coil | 932 | 952 | - | - | |
Lal12g0867 | 1540 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 651 | 874 | IPR003439 | GO:0005524 | |
Lal12g0867 | 1540 | PANTHER | MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN | 79 | 1540 | - | - | |
Lal12g0867 | 1540 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1284 | 1524 | IPR027417 | - | |
Lal12g0867 | 1540 | Pfam | ABC transporter transmembrane region | 340 | 605 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Lal12g0867 | 1540 | Pfam | ABC transporter transmembrane region | 977 | 1217 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Lal12g0867 | 1540 | Gene3D | - | 1277 | 1530 | IPR027417 | - | |
Lal12g0867 | 1540 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 977 | 1247 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Lal12g0867 | 1540 | Pfam | ABC transporter | 669 | 803 | IPR003439 | GO:0005524 | |
Lal12g0867 | 1540 | Pfam | ABC transporter | 1311 | 1459 | IPR003439 | GO:0005524 | |
Lal12g0867 | 1540 | CDD | ABCC_MRP_domain2 | 1292 | 1512 | - | - | |
Lal12g0867 | 1540 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 340 | 617 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Lal12g0867 | 1540 | ProSitePatterns | ABC transporters family signature. | 776 | 790 | IPR017871 | GO:0005524 | |
Lal12g0867 | 1540 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 79 | 1540 | - | - | |
Lal12g0867 | 1540 | CDD | ABCC_MRP_domain1 | 651 | 850 | - | - | |
Lal12g0867 | 1540 | CDD | ABC_6TM_ABCC_D1 | 338 | 625 | IPR044746 | GO:0140359 | |
Lal12g0867 | 1540 | SUPERFAMILY | ABC transporter transmembrane region | 974 | 1276 | IPR036640 | GO:0005524|GO:0016021 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal12g0867 | Lal-Chr12 | 7082835 | 7091746 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal12g0867 | 651 | 867 | Calmodulin-binding Proteins | AT2G36910 | 32.203 | 3.80e-21 | 99.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal12g0867 | - | - | gmx:100781010 | 2566.19 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal12g0867 | 12 | 7082835 | 7091746 | Lal12g0867 | 12 | 7082835 | 7091746 | ECH | |
Lal12g0867 | 12 | 7082835 | 7091746 | Lal13g1059 | 13 | 7834868 | 7844241 | LSH | |
Lal1g1871 | 1 | 21010200 | 21018187 | Lal12g0867 | 12 | 7082835 | 7091746 | PCT | |
Lal12g0867 | 12 | 7082835 | 7091746 | Lal1g1871 | 1 | 21010200 | 21018187 | PCT |