Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0401 ATGAGTTCTTCTGATAATAATAATAATAAAGAAGAGGTTCATGTTTTGTTGGTGGCGTTTTCAGCCCAAGGCCACATCAACCCCTTACTCAGGTTAGGCAAAAGTCTCCTTAATAAAGGCCTTCATGTTTCACTCGCCACCACTGACTTACTTTACCACCGAGTCTTCAAATACACCACCAACGGTGGCGACTCCTCCACCGTCCCCACTTCTATCACTACCAATGGAATCCAAGTTTTTTTCTTCTCTGATGGTTTTCAAACCGATGAAGAACGCAAGGCTGGATTAGACAATTATATGGAAGGTATAGCAAAATATGGACCAATCAACCTCTCTAACATCATCAAAAACCACTTCCTAGATGCTTCAAAAAAACTAGCTTGCATTATCAATAACCCTTTTGTCCCATGGGTAGCAGATATAGCTGCTGAGTTTAACATCCCATGTGCTTGTTTTTGGATTCAACCTTGTGCTCTCTTTGCCATATACTACTCTTTCTACAACAACCTTAACAATTTCCCCACTCTCGCTGACCCTGACATGAGTGTCAAATTACCAGGTTTGCCCCTACTTCAAACACAAGACCTTCCAAGTTTTGTTCTCCCATCAAACCCTTTTGGAACGTTCACTAAGCTTTTGTCAAGTGTGTTCAAAGGAATGGATAAACTCAAGTGGGTATTTGTAAATTCATTCTATGAGCTTGAGAAAGATATCATAGATTCTATGTCTCAAGTATTCCCTATAATCACGGTGGGTCCAGTAGTCCCAGTATCGTTATTAGGGGGAGATGAAAATTCAGACGTTGGAATTGAAATGTGGAAACCACAAGACTCATGCATGGAGTGGCTTAACCACAAGCCTGATTCGTCTGTTATATACATATCTTTTGGAAGCTTGACTGTGTTATCTTCTGAGCAAAAAGAGAGCATAGCTGAGGCTTTAAAGAAAAGTCACCACCCTTTTCTTTGGGTTATAAAAGAAGAAAACGAAGAGCTTCCGCTACCAAAGGAGTTCTTGGAAGAAACGAAAGATCGAGGCATGGTGATTCCATGGTGCCCACAAACCAAGGTTTTGGCTCACCCTGCAGTTGCATGTTTTTTAACACACTGTGGTTGGAACTCAATGTTGGAAGCTATAATTGCAGGGAAGCCAATGATTGGTTATCCAAAATGGACTGATCAACCCACCAATGCAAAACTCATCACTGATGTGTTCCATACTGGGGTTAGGCTGAAACAGGATAGTGATGGATTTGTTTCAAGTGAGGAAGTCGAAAAAGCTATTCAACAAGTTCTTCAAGGGCCAACTTCTGAAGAGTTTAAGAACAATGCGGAGGAACTGAAACGTGCTGGAAGGGAAGCCGTCGCTCGGGGTGGCTCATCTGACCGGAATATTCAGTCTTTTGTTGATGAGATTCTTGGTAACAAAACGATTGATCATTGA 1443 0.4158 MSSSDNNNNKEEVHVLLVAFSAQGHINPLLRLGKSLLNKGLHVSLATTDLLYHRVFKYTTNGGDSSTVPTSITTNGIQVFFFSDGFQTDEERKAGLDNYMEGIAKYGPINLSNIIKNHFLDASKKLACIINNPFVPWVADIAAEFNIPCACFWIQPCALFAIYYSFYNNLNNFPTLADPDMSVKLPGLPLLQTQDLPSFVLPSNPFGTFTKLLSSVFKGMDKLKWVFVNSFYELEKDIIDSMSQVFPIITVGPVVPVSLLGGDENSDVGIEMWKPQDSCMEWLNHKPDSSVIYISFGSLTVLSSEQKESIAEALKKSHHPFLWVIKEENEELPLPKEFLEETKDRGMVIPWCPQTKVLAHPAVACFLTHCGWNSMLEAIIAGKPMIGYPKWTDQPTNAKLITDVFHTGVRLKQDSDGFVSSEEVEKAIQQVLQGPTSEEFKNNAEELKRAGREAVARGGSSDRNIQSFVDEILGNKTIDH 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0401 480 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 11 472 - -
Lal12g0401 480 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 280 447 IPR002213 GO:0008194
Lal12g0401 480 PANTHER GLYCOSYLTRANSFERASE-RELATED 12 474 - -
Lal12g0401 480 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 12 474 - -
Lal12g0401 480 ProSitePatterns UDP-glycosyltransferases signature. 351 394 IPR035595 -
Lal12g0401 480 Gene3D Glycogen Phosphorylase B; 18 465 - -
Lal12g0401 480 CDD GT1_Gtf-like 14 454 IPR002213 GO:0008194
Lal12g0401 480 Gene3D Glycogen Phosphorylase B; 267 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0401 Lal-Chr12 2850850 2852292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0401 11 472 Glycosyltransferase AT2G23260 43.882 9.76e-133 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0401 K13692 - gmx:100778995 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0401 12 2850850 2852292 Lal12g0401 12 2850850 2852292 ECH
Lal12g0401 12 2850850 2852292 Lal13g0399 13 2502709 2504151 LSH