Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0400 ATGAGGTGGTTGGTGGCATTGGCCTTAACTGTCTCCATACTATTTGGAGATATCGCCGACAGCTTCGACGGCGGCGGCCACCCTAAACAACAGCAGAGTATGTGCGCCGAGATCATCATCCCCGCCGGTTACCCCTGCTCCGAATATATGATTGAAACAAAGGATGGTTTCTTGTTAGGTCTTCAACGTGTTTCTTCTTCTTCTTCTTATCTTCGTCTTGGATCTTCTGCACAACCTCAACGAGGTCCTCCGATTCTGCTTCAGCATGGCCTATTCATGGCAGGGGATGCATGGTTTCTAAATAATCCAGAACAATCATTGGGCTTCATCCTTGCAGATCATGGTTTTGATGTTTGGGTAGGAAATGTGCGAGGAACACGTTGGAGCCATGGGCATATTTCCTTATCTGAGAAGAAAAAGAAATTTTGGGATTGGAGTTGGGAGGAATTAGCCCTGTATGATCTTGCAGAAATGATCAATTACATTAATTCAGTAACAAACTCAAAGCTATTTGTAGTTGGGCATTCCCAGGGGACAATTATGTCTCTGGCTGCGTTTACTCAACCAGAGATAGTAGAAAAGGTTGAAGCTGCAGCTCTTTTATCTCCAATATCATACTTAGATCATGTCAGTGCCCCCTTTGTACTTAGAATGGTTAGCATGCACATTGATCAGATTATTCTTGATATGGGTGTTCACCAACTGAACTTCAAAAGCGAATGGGGAGCCAGTCTCTTGGTTTCCATATGTGATACTGGTCTTAGTTGTGAAGACATGCTGGCATCCATAACAGGGCAGAATTGCTGCTTCAATGAGTCACGTGTGGCCTATTATCTTGAACAAGAACCTCACCCATCATCCTCCAAAAACTTGTGCCACCTTTTCCAGATGATCCGCAAAGGTACCTTCTCAAAGTATGATTATGGAATGCTCAAAAATCTGAAAGTGTATGGCATGTCCACACCACCAAAATTCGATCTTAGAAGCATACCTAAATCATTGCCGCTGTGGATGGCTTATGGGGGAAAGGATGCTTTAGCAGATATAACTGATTTTCAGCACACTCTCAAGGATTTGTCATCCACACCGGAGGTGGTTTATCTTGAAAACTATGGTCATGTTGACTTCATTTTAAGCTTGCAAGCAAAGCAGGATCTCTATGACCCTATGATTCGTTTTTTCAAGTCATTGGGAAAATCTAGCAGTATTTAA 1212 0.4299 MRWLVALALTVSILFGDIADSFDGGGHPKQQQSMCAEIIIPAGYPCSEYMIETKDGFLLGLQRVSSSSSYLRLGSSAQPQRGPPILLQHGLFMAGDAWFLNNPEQSLGFILADHGFDVWVGNVRGTRWSHGHISLSEKKKKFWDWSWEELALYDLAEMINYINSVTNSKLFVVGHSQGTIMSLAAFTQPEIVEKVEAAALLSPISYLDHVSAPFVLRMVSMHIDQIILDMGVHQLNFKSEWGASLLVSICDTGLSCEDMLASITGQNCCFNESRVAYYLEQEPHPSSSKNLCHLFQMIRKGTFSKYDYGMLKNLKVYGMSTPPKFDLRSIPKSLPLWMAYGGKDALADITDFQHTLKDLSSTPEVVYLENYGHVDFILSLQAKQDLYDPMIRFFKSLGKSSSI 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0400 403 PANTHER LYSOSOMAL ACID LIPASE-RELATED 28 397 - -
Lal12g0400 403 PANTHER TRIACYLGLYCEROL LIPASE 1 28 397 - -
Lal12g0400 403 SUPERFAMILY alpha/beta-Hydrolases 37 395 IPR029058 -
Lal12g0400 403 Pfam Partial alpha/beta-hydrolase lipase region 36 101 IPR006693 GO:0006629
Lal12g0400 403 Gene3D alpha/beta hydrolase 26 396 IPR029058 -
Lal12g0400 403 PIRSF Steryl_ester_lip 1 399 IPR025483 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0400 Lal-Chr12 2842645 2850425 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0400 1 402 Acyl Lipid Metabolism Gene Families AT2G15230 60.199 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0400 K01052 - gmx:100803830 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0400 12 2842645 2850425 Lal12g0400 12 2842645 2850425 ECH