Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0394 ATGGTAAAGGAAAATAAACCGGGTTTCTTCTCCGCTTTCAAAGGAAAAGTGGTTCGCAGCTTCTCACCTTATCACTCCCGGTCCAATACTGTAACCCGAACCGGTTCATCAAAGTCGCTGATAGGCGAGACTCTCGCTCCACTGATTGAAGGACCCGACCCGGATGTGTGGGGAAACGATGAACCGAAGAAAGTTGGGTCCGGTTTGGGGCATTGGATGAAGGAACACCTTTCACGTTCATCGTCAGTGTCTTCATCGTCGTATAAAAGCTCTGATCTGAGGCTTCTTTTGGGTGTAATGGGTACTCCTCTTGCTCCTGTTCATGTCTCCGCTACTGACCCATTTCCTCATCTCAGTATCAAGGACACTCCCATTGAAACTTCATCTGCCCAGTACATATTGCAGCAGTACATTGCAGCATCAGGAGGGCAGAGGTTGCAAAACTCTATAAAAAATACATATGCAATGGGTAAGGTGAGAATGGTGTCTTCTGAATTTGAATCCGCAAGAGGAGTTGTGAAGAATTGGAGTGCCTCTAAGTGTGCAGAGTCAGGTGGATTTGTGCTCTGGCAGATGAACCCCGACATGTGGCATGTCGAACTTGCAGTTGGAAGAAGCAAGGTTCAAGCCGGTTGCAATGGTAAACTCGTTTGGAGGCACACACCTTTACTTGGTGCTCAGACTGCAAAGGGGCCTGTGAGGCCTTTGCGGCGTGCACTTCAGGGTCTCGACCCTAGAACCACTGCGAGTATTTTTGCCAATGCCAAATGCATTGGAGAGAAGAATATCAATGGTGAAGACTGCTTCACCCTTAAGCTTTCTACTGACCCCGAGACTTTGAAGGCCCGAGGTGAAGGTCCTTCTGAGATCATAAGGCATATCTTATTGGGCTATTTTAGCCAAAAGACTGGACTTCTAGTTCACATTGAGGATTCTCACCTGACCCGCAACCAATGTAATGGAGCTGATGCAGTTTATTGGGAAACCACAATCAATTCAGACCTCTATGATTATAGGCCCGTGGACGGGATCATGGTTGCAAACTCGGGGCATTCGGTGGCAACTCTTTATAGGTTTGGGGAGACAGCTATGAGCCACACCAAAACCAAGATGGAAGAAACCTGGACGATTGACGAGGTTGCATTCAATGTTCCAGGTCTTTCGGTAGATTGCTTTATTCCACCAGCTGATTTAAGAACAGATTCTGTCAGTGAAGGTTGTGAACTACCTCAGGATGACAGACAAAAGAATTCACTTGCAGTTCATTGGGCCAAAGTCATTGCACTGGAGAAATCGCATAATCTCGACATCGAAAACGTGATTTGGAGGATGGAAATCTAG 1341 0.4691 MVKENKPGFFSAFKGKVVRSFSPYHSRSNTVTRTGSSKSLIGETLAPLIEGPDPDVWGNDEPKKVGSGLGHWMKEHLSRSSSVSSSSYKSSDLRLLLGVMGTPLAPVHVSATDPFPHLSIKDTPIETSSAQYILQQYIAASGGQRLQNSIKNTYAMGKVRMVSSEFESARGVVKNWSASKCAESGGFVLWQMNPDMWHVELAVGRSKVQAGCNGKLVWRHTPLLGAQTAKGPVRPLRRALQGLDPRTTASIFANAKCIGEKNINGEDCFTLKLSTDPETLKARGEGPSEIIRHILLGYFSQKTGLLVHIEDSHLTRNQCNGADAVYWETTINSDLYDYRPVDGIMVANSGHSVATLYRFGETAMSHTKTKMEETWTIDEVAFNVPGLSVDCFIPPADLRTDSVSEGCELPQDDRQKNSLAVHWAKVIALEKSHNLDIENVIWRMEI 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0394 446 Pfam Protein of unknown function (DUF620) 154 395 IPR006873 -
Lal12g0394 446 PANTHER LIPASE 31 445 - -
Lal12g0394 446 PANTHER LIPASE 31 445 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0394 Lal-Chr12 2793023 2795825 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0394 - - gmx:100813272 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0394 12 2793023 2795825 Lal12g0394 12 2793023 2795825 ECH
Lal12g0394 12 2793023 2795825 Lal13g0387 13 2427713 2431676 LSH
Lal12g0394 12 2793023 2795825 Lal24g0303 24 2170150 2173033 LSH