Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0390 ATGGCCACTGCTTTTCTTAAGAACCCCACCAACAAAATTTCTCATTTCTTGATCCAGAGACAGTTGTTTAACCGTTACCCTCTCAATGAACCAATCAAAATTCATCCTTTTATCATCTGCAACAAAATGCACTCTAGACCTTATTTTCAATTACCCTATTATTGTATGAGGAAACCCAGAGAATATAAAATATCTTCTCCTTCTATGTTTTCTTCATTCTTTTGTTCTTCTTCTTCCTCCTCCTCTTCTGCTACTACTCCAGCAACTTCAATCTCCAAGGTTGGCATTGTGGGTTGGTATTTGGGGATGATCAAGTCATGGCCCATTCTCACCAAGAGTGTTACTTCTGGACTTATTTACACTGCTGCTGATTTATCCTCCCAGACTATTGTGCGGCAATCATCGGAGCCTTTTGATTTTGTAAGGACTTTACGCATGGCAGGATATGGGATGATCATATTAGGACCCACACTGCATTTCTGGTTCAATTTTGTGTCAAAGCTTTTCCCGAGGAGGGATCTTCTCTCTACAGTAAAGAAAATGGTCATGGGCCAGACACTTTATGGACCTGCCATGACTGTTGTTTTTTTCTCCTTTAATGCACATATGCAGGGTGAAACCTCCACAGAGATTGTTTCTCGATTAAATCGTGATTTGCTTCCTACATTGTTAAGTGGAATTATGTACTGGCCTGTATGCGACTTCATTACATTTAGATTCATTCCTGTCCACCTACAGCCATTAGTGAGCAATTCATTTTCATACTTGTGGACCGTTTATCTGACCTATATGGCAAGCCTAGAGAAAGCAGAGACAGCTAGCTGA 825 0.4048 MATAFLKNPTNKISHFLIQRQLFNRYPLNEPIKIHPFIICNKMHSRPYFQLPYYCMRKPREYKISSPSMFSSFFCSSSSSSSSATTPATSISKVGIVGWYLGMIKSWPILTKSVTSGLIYTAADLSSQTIVRQSSEPFDFVRTLRMAGYGMIILGPTLHFWFNFVSKLFPRRDLLSTVKKMVMGQTLYGPAMTVVFFSFNAHMQGETSTEIVSRLNRDLLPTLLSGIMYWPVCDFITFRFIPVHLQPLVSNSFSYLWTVYLTYMASLEKAETAS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0390 274 Pfam Mpv17 / PMP22 family 203 261 IPR007248 GO:0016021
Lal12g0390 274 PANTHER OS12G0508100 PROTEIN 25 272 - -
Lal12g0390 274 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 25 272 IPR007248 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0390 Lal-Chr12 2761691 2770392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0390 93 269 Miscellaneous Gene Families AT2G14860 70.056 2.03e-97 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0390 K13348 - gmx:100816797 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0390 12 2761691 2770392 Lal12g0390 12 2761691 2770392 ECH
Lal12g0390 12 2761691 2770392 Lal24g0299 24 2143752 2147454 LSH