Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0377 ATGAAGCAGTGCATAGCAGAACCCCATAGAGCTCAGTATGGAGGGGGCATTATAGTAAATCCAGGATTTGATGACAATATAGAGGGTTGGAGAGTATTTGGAAAAGGAACAATTGATGAAAGAATATCAAATGAAGGCAATAGATTCATTGTTGCACGTAACAGAACACATCCTTTAGATAGTTTCTCCCAAAAAGTCCAACTTCAGAAAGGAATGCTATACACCTTTTCTGGTTGGTTTCAGGTGAGTGAAGGAAGTGAGATTGTGTTAGTTATATTCAAAACTAGTGGAAGTGAAGTAATAAGAGGTGGACACGTGATAGCAAAGCATGGATGCTGGAGTTTGCTAAAAGGTGGCATAGTTGCAAACATCTCAAGCCATGCTGAAATTCTTTTTGAGTTAACAATGCAGAGCAAGAATTCAAAGGTGGAAATATGGGCTGATAGTATCTCCTTGCAACTATTCAGTGAAACACAATGGAGACAACACCAAGATGAAAACATTGAGAGGGTGCGTAAGAGCAAGGTGAGATTGCAGGTTACAGACATAAATGAATCAGCATTGGAAGGAGCTAAAGTATTCATCAATCAAACAAAGGCAAGCTTCCCATTTGGATGTGGAATAAATGACCATATTCTCACAAGCAAAGAATACCAGAAATGGTTTGTGTCAAGATTCAAATACGCAACTTTCACCAATCAGATGAAGTGGTATTATACAGAGAAAGAGCGAGGGGTGGAAAACTACACTATCGCGGATGCCATGCTTAAATTCACCAAAGACAATGACATTAGTGTTAGAGGACATAACATTTTATGGGACAATCCAAGACAACAACCTGAATGGGTCAAGACCCTATCTCCTGAAGAATTAAAAGAAGCAGCAGCAAAAAGAGTAGAGTCTGTAGTTTCAAGGTATAGAGGAGAATTGATTGCATGGGATGTGATGAATGAGAATTTGCACTTCCACTTTTACGAGGATAAGCTAGGTAAAAATGCTTCTGAAGAATATTATGCTAAAGCATATCACCTTGATCCAAACACAACCATGTTCTTGAATGAGTTCAACACCCTTGAATATAGTAACGACTCGCATTCAAGTCCACAGAACTATCTCAAGAAACTTGAGCAGATTCTGTCATTTCCAGGTACTAGTGGAATATCAGCAGCAATAGGGTTGCAAGGTCATTTTGGTCCTGACCCGCCAAACATGCCTTACATAAGGAGTGCTCTAGAACTTCTCAGTACTGCTGGAGTTCCAATTTGGCTCACAGAAGTTAGTGTTTCTCCACACCAAAATCAGGCACATTATTTGGAATTAATACTAAGAGAAGCTTACTCTCATGCTTCTGTTGAAGGGATTATACTGTTCTCAGGTCCAGCAACAGCTGGCTTCAATGAAACGACCCTGGTAGATGAAAATTTCCAAAATACTGACGCTGGAGACGTTGTGGACAATCTTATTAGGGACTGGGAGATTTTGCCTCCGAAAGCCATAGCAGATAACACAGGGTTTGTAGAAATTTCACTACCACATGGTGATTATGATGTAACTGTCACACATCCTCTAACCAACTCCTCCAAAACACTGAAGCTGAGTGTAGGAAAAAGTTTTCCTCAAGAAACCATCCAAGTGAAATTCCACACCTAA 1650 0.3994 MKQCIAEPHRAQYGGGIIVNPGFDDNIEGWRVFGKGTIDERISNEGNRFIVARNRTHPLDSFSQKVQLQKGMLYTFSGWFQVSEGSEIVLVIFKTSGSEVIRGGHVIAKHGCWSLLKGGIVANISSHAEILFELTMQSKNSKVEIWADSISLQLFSETQWRQHQDENIERVRKSKVRLQVTDINESALEGAKVFINQTKASFPFGCGINDHILTSKEYQKWFVSRFKYATFTNQMKWYYTEKERGVENYTIADAMLKFTKDNDISVRGHNILWDNPRQQPEWVKTLSPEELKEAAAKRVESVVSRYRGELIAWDVMNENLHFHFYEDKLGKNASEEYYAKAYHLDPNTTMFLNEFNTLEYSNDSHSSPQNYLKKLEQILSFPGTSGISAAIGLQGHFGPDPPNMPYIRSALELLSTAGVPIWLTEVSVSPHQNQAHYLELILREAYSHASVEGIILFSGPATAGFNETTLVDENFQNTDAGDVVDNLIRDWEILPPKAIADNTGFVEISLPHGDYDVTVTHPLTNSSKTLKLSVGKSFPQETIQVKFHT 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0377 549 SUPERFAMILY Galactose-binding domain-like 14 152 IPR008979 -
Lal12g0377 549 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 2 546 - -
Lal12g0377 549 PANTHER GLYCOSYL HYDROLASE 2 546 IPR044846 GO:0004553|GO:0005975
Lal12g0377 549 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 184 487 IPR001000 GO:0004553|GO:0005975
Lal12g0377 549 SUPERFAMILY (Trans)glycosidases 189 491 IPR017853 -
Lal12g0377 549 Gene3D Glycosidases 191 493 - -
Lal12g0377 549 SMART glyco_10 235 488 IPR001000 GO:0004553|GO:0005975
Lal12g0377 549 Pfam Glycosyl hydrolase family 10 198 436 IPR001000 GO:0004553|GO:0005975
Lal12g0377 549 Pfam Carbohydrate binding domain 16 137 IPR003305 GO:0016798
Lal12g0377 549 Gene3D - 6 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0377 Lal-Chr12 2681539 2685639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0377 3 534 Glycoside Hydrolase AT4G33840 46.355 2.32e-176 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0377 - - gmx:100802367 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0377 12 2681539 2685639 Lal12g0377 12 2681539 2685639 ECH