Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0281 ATGGGATCAAATTCTGAAATGGAGGAAGATGTGAAGCTTGATGAGCTTCCCTCAGCGATTCTCGCCACCATCATGACCAAGCTTGACATCGCTTCTATCTGTTCCTTAGCTTCTACCTCCTCCACTTTCCACTCCTGCGCTAAACAAATCCTCTCTTTCCTTTCCAACTTCCATCTTCTTGAAATTGCACCCTCTGGTGAGTTGCTGAGACCGTTGTTGCCACCAAATCCTTATCTTAAGACCCTTAAGGTTGATTGTGCACGTCTTGATGATTCTGCAATACCCTTTTTAGTGAAACCTTCATTGCATGATCTTTGTCTTCACAACTGTGCTGATTTCAGTGGTAAACTGCTTTCTCAGATTGGGATCCAGTGCAAGGACCTTAGGTCTCTCTATTTGGGCTCTGTAGCAGAAAAAAGAGGGAGGTCTATTCATATTTCTGATCTTGAAGATTTACTCACCGGCTGCTCCCAGTTAGAAGCATTGGTTCTGATGTTTGATGTCTCCCTCTTTCTACGTCATAACTTTGCTGGAGTTTGGGCTTCTGCCTCAGAGAACCTCACTTCTCTTGAAATTGGATACATTTCTTCAGTTACTGTGACTGAACTGCTAAGCCCAAATTTGGGATCCCATCAGTCCCTAAATCCTGTTCAGCCTTCCATGCTTCCAAGCATTCAGAAACTATGTCTTTCTGTAGACTATATAACTGATGCCATGATTGGTACAATATCCAAAGGTCTTGTCTTCTTGACCCATTTGGATCTTCGGGATGCACCACTGATTGAACCAAGAATTACATTTGACCTAACCAATGCTGGCCTTCAACAAATTAATCAACACGGGAGATTGAAACACCTTTCGTTGGTCCGAAGCCAAGAGTTCCTAATCACCTACTTTCGAAGAGTGAATGATCTAGGATTACTTTTAATGGAAGAAAAATGTGCAAACATGGAGAGCATATGTCTTGGTGGCTTTTGTCGTGTCACAGACACTGGTTTCAAAACCATCTTGCACTCATGCTCTCGCTTATACAAGTTTAAGGTCACTTATGGGACTCAGTTAACTGATCTAGTTTTTCATGATATCTCAGCAACATCCCTTGCCTTAACACATGTGAGCTTAAGATGGTGCAATTTGTTAACCAACAATGCAGTTTTTAGTTTGGCATCAAACAAGGAACTTAAAGTTCTCGACTTGAGAGATTGCAGGAGCCTTGGGGATGAAGCTCTCCGAGCCATTGGCATTCTTCCAGGACTGAAAATGTTACTACTGGATGGGTCTGATATAACTGATGCAGGTCTTTCACACTTAAGACCATGTGTTATTAATACACTATTCGCATTGTCTCTCCGAGGGTGCAAGAGACTTACAGATAAATGCATCACAGCTCTATTCGATGGTTGTGGAGTGCTGGAATTGCGAGAACTGGATCTATCCAATCTTCCTAACCTCTCAGATAATGGAGTTCTTCAGCTGGCAAAAACTCGGATTCCCTTCTTTGAACTCCGGATGCGACAGTGCCCTCTAATTGGTGATACATCGATCATGGCATTAGCTTCAATGCTGGTGGATGAGGCCATATGGCATGGAAGCAGTTTGCGCTTAATGGATCTTTATAATTGCGGTCGCATTACACAGCTAGCGTTTCGCTGGTTAAAGAGACCATATTTTCCAAGGCTTAAATGGTTGGGAGTAACCGGAAGTGTGAATAGAGATATGGTAGATGCTTTAGCTAGAAGTAGACCATTCTTGCATGTGGCATGCCATGGTGAGGAGCTTGGAGCTGATCCATATGATATATCAGATGGTTTATATACACATGACTATGATGAGGTGGATGAATTTGAGCAATGGCTTCTTGAAGCTGATGTTGATACTGAAGATGAAGAAATGGGTGATGCTGAAATTAATGAAGAACTTATTCTGTAG 1929 0.4241 MGSNSEMEEDVKLDELPSAILATIMTKLDIASICSLASTSSTFHSCAKQILSFLSNFHLLEIAPSGELLRPLLPPNPYLKTLKVDCARLDDSAIPFLVKPSLHDLCLHNCADFSGKLLSQIGIQCKDLRSLYLGSVAEKRGRSIHISDLEDLLTGCSQLEALVLMFDVSLFLRHNFAGVWASASENLTSLEIGYISSVTVTELLSPNLGSHQSLNPVQPSMLPSIQKLCLSVDYITDAMIGTISKGLVFLTHLDLRDAPLIEPRITFDLTNAGLQQINQHGRLKHLSLVRSQEFLITYFRRVNDLGLLLMEEKCANMESICLGGFCRVTDTGFKTILHSCSRLYKFKVTYGTQLTDLVFHDISATSLALTHVSLRWCNLLTNNAVFSLASNKELKVLDLRDCRSLGDEALRAIGILPGLKMLLLDGSDITDAGLSHLRPCVINTLFALSLRGCKRLTDKCITALFDGCGVLELRELDLSNLPNLSDNGVLQLAKTRIPFFELRMRQCPLIGDTSIMALASMLVDEAIWHGSSLRLMDLYNCGRITQLAFRWLKRPYFPRLKWLGVTGSVNRDMVDALARSRPFLHVACHGEELGADPYDISDGLYTHDYDEVDEFEQWLLEADVDTEDEEMGDAEINEELIL 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0281 642 SUPERFAMILY RNI-like 303 567 - -
Lal12g0281 642 SMART LRR_CC_2 470 495 IPR006553 -
Lal12g0281 642 SMART LRR_CC_2 366 391 IPR006553 -
Lal12g0281 642 SMART LRR_CC_2 501 521 IPR006553 -
Lal12g0281 642 SMART LRR_CC_2 442 467 IPR006553 -
Lal12g0281 642 SMART LRR_CC_2 392 416 IPR006553 -
Lal12g0281 642 SMART LRR_CC_2 314 339 IPR006553 -
Lal12g0281 642 PANTHER UNCHARACTERIZED 16 558 - -
Lal12g0281 642 Gene3D Ribonuclease Inhibitor 277 368 IPR032675 -
Lal12g0281 642 ProSiteProfiles F-box domain profile. 10 57 IPR001810 GO:0005515
Lal12g0281 642 Pfam F-box domain 13 50 IPR001810 GO:0005515
Lal12g0281 642 SUPERFAMILY F-box domain 5 48 IPR036047 GO:0005515
Lal12g0281 642 Gene3D Ribonuclease Inhibitor 9 265 IPR032675 -
Lal12g0281 642 SUPERFAMILY RNI-like 53 289 - -
Lal12g0281 642 PANTHER RNI-LIKE SUPERFAMILY PROTEIN-RELATED 16 558 - -
Lal12g0281 642 Gene3D Ribonuclease Inhibitor 416 597 IPR032675 -
Lal12g0281 642 Pfam Leucine Rich repeat 391 413 IPR001611 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0281 - - gmx:100789353 1075.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0281 12 2009775 2012814 Lal12g0281 12 2009775 2012814 ECH