Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0276 ATGGGAATGGGAATGGGAATGGGAATGGGGAGTGTTCAACTCCAATTGAGTCTTCCTTATCCTAATGGGTCATGGAAATTGAAGGAAAACAAAATAAGAAGAATGATGATGCAAACTTGTACACTCACCAAACAAGGTGAACGCTTCCTCACTAAACTCGCCACAACTTCTTCCACTGACAGTTTGATACGAAAATTCGTGCAAGGCTCTCCCAAATCCATTGCTCTCACCACTCTCTCACACCTTCTATCCCCTTCTACTTCATACCCACAACTCTCATCACTTGCCGTTCCTCTTTATGCTAGAATCAGTGAAGCACCTTGGTTCAATTGGAACCCCACCATTGTGGCAGACCTGGCTGCCCTGCTAGATACACAGGGTCGGCACGACCAAGCTGAAACACTGATTTCAGAGGCCACTTCAAGATTAGAATCTAACAAACGAGAACTTGCACTTTTTTACTGCAAACTAGTAGAGTCACATTCCAAGCGAAGTGCACAAATAGGGTTTGATGTTGCCTATTCTTACCTCAACCAGCTTCTTCATACTTCATCCTCGGTTTACATTAAACGCAAGGCTTATGAGTACATGGTTAGTGGTTTGTGTTCGATGGATAGGCCTCGGGAGGCTGAGAATTTGGTTCAAGATTTGAGAGATAATGGAGGGCTTGAACCTTCAGCTTTTGAGTTGAAATCCATTGTGTATGGATACGGAAGATTGGGTTTGTTTCAAGACTTGCAGAGAGTTGTGGATCAAATGGAGAAAAGTGGGTTTGTTATTGATACGGTTTGTTCCAATATGGTTCTTTCAACCTATGGCATTCATGGGGAGCACATGGAAATGGTATCCTGGCTTCAGAGGATGAGAAACTCCGGCATTCCCTTTTCGGTTAGAACTTACAATTCTGTTTCAAATTCTTGCCCTACAATCATGAGAAAGATGGTGGAGTTGAATGATTTACCACTGTCAATTGGAGAGTTGGATGCAAGCTTAGAAGGAGGGGAGGCTATGTTAGTTAAAGAGATGCTTGGGTCTTGTGTGATTCTGGAGGAGGTAATGGTGTGGAGTTCATTGGAGGTAAAATTGGATTTGCATGGATTTCATTTGGGTTCATCATACTTAGTCATGTTACTTTGGTTGGAGGAGATGCATAGAAGGTTGAATGAATCAAGTTATGGAATTCCTGCAGAAATCACAGTGGTTTGTGGGGCAGGAAAGCATAGCAATGTTAGAGGAGAATCACCAGTCAAAGTCATGGTTAAAGAGATGATGGTGAAAATGAAAAGTCCACTTAGGATTGATAGGAAGAATAATGGCTGCTTTGTTGCCAAAGGTAGAGCTGTAAAAAACTGGTTATGTGAAATGAAGTCATGTTCAAAATGA 1383 0.4215 MGMGMGMGMGSVQLQLSLPYPNGSWKLKENKIRRMMMQTCTLTKQGERFLTKLATTSSTDSLIRKFVQGSPKSIALTTLSHLLSPSTSYPQLSSLAVPLYARISEAPWFNWNPTIVADLAALLDTQGRHDQAETLISEATSRLESNKRELALFYCKLVESHSKRSAQIGFDVAYSYLNQLLHTSSSVYIKRKAYEYMVSGLCSMDRPREAENLVQDLRDNGGLEPSAFELKSIVYGYGRLGLFQDLQRVVDQMEKSGFVIDTVCSNMVLSTYGIHGEHMEMVSWLQRMRNSGIPFSVRTYNSVSNSCPTIMRKMVELNDLPLSIGELDASLEGGEAMLVKEMLGSCVILEEVMVWSSLEVKLDLHGFHLGSSYLVMLLWLEEMHRRLNESSYGIPAEITVVCGAGKHSNVRGESPVKVMVKEMMVKMKSPLRIDRKNNGCFVAKGRAVKNWLCEMKSCSK 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0276 460 Gene3D Tetratricopeptide repeat domain 95 333 IPR011990 GO:0005515
Lal12g0276 460 SUPERFAMILY SMR domain-like 360 444 IPR036063 -
Lal12g0276 460 Gene3D - 360 444 IPR036063 -
Lal12g0276 460 PANTHER ATPASE EXPRESSION PROTEIN 3 21 454 - -
Lal12g0276 460 PANTHER OS02G0120000 PROTEIN 21 454 - -
Lal12g0276 460 ProSiteProfiles Smr domain profile. 362 446 IPR002625 -
Lal12g0276 460 Coils Coil 129 149 - -
Lal12g0276 460 Pfam PPR repeat 265 293 IPR002885 -
Lal12g0276 460 Pfam PPR repeat 232 258 IPR002885 -
Lal12g0276 460 Pfam PPR repeat 196 221 IPR002885 -
Lal12g0276 460 SMART SMR_2 359 446 IPR002625 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0276 193 305 Glycosyltransferase AT1G05670 26.549 7.52e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0276 - - cam:101506627 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0276 12 1962932 1965639 Lal12g0276 12 1962932 1965639 ECH