Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0084 ATGGGAGAAGACGAAGATTTGGAAATTGCGATTCGGATGAGCATGCAACAAGTCGATGACGTCATCACCGGAGATGTTTCTGCTGATTCCGGTGAATCTATGACCCGCCGCCGTGAACTCATGGCTGCCGCCGCTGAGAAGCGGATGGCGGCTGCTGCTATTATTTCTCCGTCTCCTTTGCCCTCGTCGGCGACGGTGGATAAAGGTAAAGAAGTGAAGAGTAGGGAGCTGTCAGTGGAAGAAGCGAATGAGTTGTTTGTAATGGTGTTTGGGAGTGAAGTCTCGAAGGGCATTCTCGCACGCTGGTGCAATCAGGGCATAAGATTTAGCTCTGATCCTGTAACATCAATGGGGCTAGTGCAGCATGAAGGCGGTCCCTGTGGGGTTTTAGCAGCTATGCAAGCATTTGTGCTCAAATACATTCTTTTCTTCAGTGATGAGTTGAAAGAGGTGCCAAGTGTGCCAAACCGGGATCTAGGCTCATCATCTAAAAGTCAACTCGTTCCATCATTTGATTTTGCCTCACTCAGTGAAGGTGTTAAACTAAGAGCCCTTGTAAGAAGCATGGGTGAAATTTTATTTTCATGCGGTGGTAATAGAAATGCTGTGATTGCAACTATGACCATTCCAGGGAATGGCATTCAGCATTTTGAAGGGATTTCTGAAGATGAGGTCTTTGTGAGATCACTTGAAGGTCTTTCCATTGAATCAGCCTTGGATCTGCAGAAAGTTCTCAGAGTTGAAACATACACATCAAGAACAACTGCTCTGCAGAGGCTTGAAGCAAATATTCATTTGTTCCAAAGTCGTGTGGGGGCATTGCTTTTCTTAATCTCTGCTTTACTTTCTCGGGGACTGGACTTGGTTCAAAGTGACAGGGATGATCCCAGCTTACCTCTGGTTACTGCTCCTTTTGGGCATGCTTCCCAGGAAATTGTAAACCTATTGCTTTGTGGGGAGGCTGTTCCTAATGTGTTTGATGGGAGGATGGATTTAGGTGGAGGAATGTTTCTGAAAGGTATATCCCGAAATGTGGAAGTTGGATTCCTCACTTTGCTAGAATCCCTGAATTTCTGCAAGGTTGGTCAGTTTCTCAAAACCCCAAAGTGGCCTATATGGGTTGTAGGGAGTGAATCCCATTACACAGTGCTGTTTGCTCTTGACCCCAGCATTCAAAATGAGAATGAACTGGAAGGAAGAGAAACACAGATTCGCAAAGCTTTTGATGCGCAAGATCAGAGCGGAGGTGGTGGTTTCATTAGTGGGGATGGGCTTCACCAAGTCCTAAGAGAAACAAATATCAAACTTCCACAACAGAAGGTTGAACAGCTTTCCAATACAGACTTCATTGTATGGAGTGAATTCTGGCAAGTAATTTTGGATCTAGACAAAAGCTTGGGAGGTCTGAAAGATTCATCAGGATTGATGGGTAAGAAGGTCTTTGAGCTGTATCATTTTAATGGGATCGCAAAATCCGACCTAAACGGCAGTCAGGTAAACTATGGTTCTGAAACTCCACTGCAAAAACCGCGGCTGACAAAGTTGAGAGTTTCCGTTCCCCCAAGGTGGACACCTGAGGAATTCATGGCAGACGTGAAAGTTTCTTCTGCTTCCAGTGCAGGTGAGTCTTCTGGGAATAATGCAGAAATATCTAAACCTGAGCCTTCTCAGCATGCACCATTGGTGGACTGCATAAAGACGCGCTGGGCTCGTGCTGTGTGCACATGGTCAGGGGATCCTCCTAGCATAGTCTGA 1755 0.4587 MGEDEDLEIAIRMSMQQVDDVITGDVSADSGESMTRRRELMAAAAEKRMAAAAIISPSPLPSSATVDKGKEVKSRELSVEEANELFVMVFGSEVSKGILARWCNQGIRFSSDPVTSMGLVQHEGGPCGVLAAMQAFVLKYILFFSDELKEVPSVPNRDLGSSSKSQLVPSFDFASLSEGVKLRALVRSMGEILFSCGGNRNAVIATMTIPGNGIQHFEGISEDEVFVRSLEGLSIESALDLQKVLRVETYTSRTTALQRLEANIHLFQSRVGALLFLISALLSRGLDLVQSDRDDPSLPLVTAPFGHASQEIVNLLLCGEAVPNVFDGRMDLGGGMFLKGISRNVEVGFLTLLESLNFCKVGQFLKTPKWPIWVVGSESHYTVLFALDPSIQNENELEGRETQIRKAFDAQDQSGGGGFISGDGLHQVLRETNIKLPQQKVEQLSNTDFIVWSEFWQVILDLDKSLGGLKDSSGLMGKKVFELYHFNGIAKSDLNGSQVNYGSETPLQKPRLTKLRVSVPPRWTPEEFMADVKVSSASSAGESSGNNAEISKPEPSQHAPLVDCIKTRWARAVCTWSGDPPSIV 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0084 584 MobiDBLite consensus disorder prediction 536 553 - -
Lal12g0084 584 SMART DUF4205_3 86 461 IPR025257 -
Lal12g0084 584 SUPERFAMILY EF-hand 400 460 IPR011992 -
Lal12g0084 584 PANTHER UNCHARACTERIZED 68 583 IPR039785 GO:0004843|GO:0071108|GO:1990380
Lal12g0084 584 Pfam Deubiquitinating enzyme MINDY-3/4, conserved domain 88 397 IPR025257 -
Lal12g0084 584 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 2 21 IPR003903 -
Lal12g0084 584 MobiDBLite consensus disorder prediction 534 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0084 Lal-Chr12 576815 582745 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0084 K22647 - gmx:100813222 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0084 12 576815 582745 Lal12g0084 12 576815 582745 ECH