Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0072 ATGGAGAACATGGAGTATGCAGAAGAGTTGGTGAGGGAATTTCTGATGTTCAGAGGATTCACAAACACTCTTCAATCTTACGATTCCGAATTGCGCTCTGATATCGGTCAATCCTTTCAGCTCGATAAGATTCTTGACCTCATTTTCTCTCTATATGTTCCTAAATTTCAGTCTCACAACTTAATTGCTCTCCTCGGTTTCTTCAATAATTATCTCTCCGAAACCACACTCGTTTCCACATTCTCTAAATTGGAAACTTCTCTTCTCCGCTTCTACGTCGTTCACGCCTTGCAATCCAATCGTGCCGATAAGGTTTTCGATTTTTTCGAAACCTATGGTGCTCAACTGTTGCAAAAATCACAGGATTGGACTCACTGGTTTGCAATTCCACACATGAAGAATCCGAACTTGGATCCCGAATTTAAGATATTTTTCACCAAGGAGTGGTATGAGGCGTTGCGTCTTTCTGTCAGAAACTTCTTCATACTTGTACTGATTGAACTTGTAGTTTCAGCAACTTATGTTTGTTTCGATAAGTTTCAGAGTTCATATCGGATCAGTTTATCTAGTTTTAAAAGGGAGGTTGAATGGTCAACGGTGTTAGTGATCAATCCCTTTCATAATTTCATGAATTCTTTTCTTAAATTATCCTTAACAAAATCACGTCTCCCTGCTCTACTGAAGATCAGTTCTGAAATGAATGCTACTAACCTACTCAAAAGAGATGTCGTGCATCTGAATCTTAAATTGTCAAAACTTCAGGCTTTACTTGAGGAGAAAGAGGCACAGTTATGCCATTTTAGTAGTATGGAAGGAACTTTTAGTTCATCAAGCAACTTGCGCGAAGAAAGTACTCATATGTCAAAAGATTCTCCAGAAGTTTTTCCAACTGTTCTTCCACGAGTTGGGCAATCAGAGATTAGTCAAGTTGTGGATGGACCTGAAAATATTAAGTCACAATCTATCATCTCGAAGTCTGGTGATGATTCAACTTCCCTATTGAATGACCATCTGGGAAATGGCGAAACTGGTGATCCTACCCAAAAAGGTCATGACAGTTCCATTATAGAAAACAGCGAGGAAGAAGATTTTCCAGAGGTCAAAGTAGAGCACCAGGAGACATTCTTAGGGCACACTAGTCCAATCACCCGATGCCGTTTCTCTGTATCTGGGAACAATATTGCTAGTGCTTCTCTGGATGGAACAGTCAGGATATGGACATATGATACATCAACTCCAGTGTCTAGAAATGCAACCATATATTGTGGCACTGAAATTTTATCACTTGACTGGGAATGTAAATCAGACCGATTGCTTCTAATAGGTACATCAGATGGGTGCATTAAGGCATGGAATGTGGATGCAAAGAGAGTTGTCTGTGACCTCAGCACAACTGAGGCGTTTCCAAGTGTATTGGACATAAAGTGCAGTCCCGTGGAGCCCATCTTTGTGTCTGCAGCAGCATCTGGAGGTGTTGGTTCCAACTACTCTGACAACCTGGGTTTCGCTTCACTAACTGTGTGGAACATGAAGACATGGAAAGCCATGACAGTCCTTCCTCTTGGAGAAGATCCACCAGCAATTACATCTCTGTGCTTTAATCACAATGGAAAGATTTTAGCAGCTTCTGCTATTGATGGAATGATTCACATATTCAAAGAAATCTGGGTTCAAATAGCGGGTGTGGAATTTAAGAGGGTGGACCTAGCGCAACGGTTCTGTTACCCCCTCAAAGATTCAAAATACTGTAGACATGAGATGGCATTAGATGCAAATGGGAGGAGACTCTTGGTAACATCCAGTTCAGTTAGAGCACCCATATATCAGGTTCAGGGTCAGATGAGTGGTTGGAGAACTCTTGCTCATGGTGCTCCTATTACTGCTGTTGATTGGCATCCAACCTTGCCAATTTTCTTGACTGGATCAGCAGATAACTCTGTCCGAGTAACATCTTTATCATCATAG 1965 0.4127 MENMEYAEELVREFLMFRGFTNTLQSYDSELRSDIGQSFQLDKILDLIFSLYVPKFQSHNLIALLGFFNNYLSETTLVSTFSKLETSLLRFYVVHALQSNRADKVFDFFETYGAQLLQKSQDWTHWFAIPHMKNPNLDPEFKIFFTKEWYEALRLSVRNFFILVLIELVVSATYVCFDKFQSSYRISLSSFKREVEWSTVLVINPFHNFMNSFLKLSLTKSRLPALLKISSEMNATNLLKRDVVHLNLKLSKLQALLEEKEAQLCHFSSMEGTFSSSSNLREESTHMSKDSPEVFPTVLPRVGQSEISQVVDGPENIKSQSIISKSGDDSTSLLNDHLGNGETGDPTQKGHDSSIIENSEEEDFPEVKVEHQETFLGHTSPITRCRFSVSGNNIASASLDGTVRIWTYDTSTPVSRNATIYCGTEILSLDWECKSDRLLLIGTSDGCIKAWNVDAKRVVCDLSTTEAFPSVLDIKCSPVEPIFVSAAASGGVGSNYSDNLGFASLTVWNMKTWKAMTVLPLGEDPPAITSLCFNHNGKILAASAIDGMIHIFKEIWVQIAGVEFKRVDLAQRFCYPLKDSKYCRHEMALDANGRRLLVTSSSVRAPIYQVQGQMSGWRTLAHGAPITAVDWHPTLPIFLTGSADNSVRVTSLSS 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0072 654 Gene3D - 276 495 IPR015943 GO:0005515
Lal12g0072 654 MobiDBLite consensus disorder prediction 318 354 - -
Lal12g0072 654 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 619 654 - -
Lal12g0072 654 Pfam WD domain, G-beta repeat 372 406 IPR001680 GO:0005515
Lal12g0072 654 Pfam WD domain, G-beta repeat 528 552 IPR001680 GO:0005515
Lal12g0072 654 Pfam WD domain, G-beta repeat 621 649 IPR001680 GO:0005515
Lal12g0072 654 SMART WD40_4 413 452 IPR001680 GO:0005515
Lal12g0072 654 SMART WD40_4 368 407 IPR001680 GO:0005515
Lal12g0072 654 SMART WD40_4 512 553 IPR001680 GO:0005515
Lal12g0072 654 SMART WD40_4 613 651 IPR001680 GO:0005515
Lal12g0072 654 Coils Coil 243 263 - -
Lal12g0072 654 MobiDBLite consensus disorder prediction 275 294 - -
Lal12g0072 654 ProSiteProfiles Trp-Asp (WD) repeats profile. 619 654 IPR001680 GO:0005515
Lal12g0072 654 MobiDBLite consensus disorder prediction 318 353 - -
Lal12g0072 654 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 375 410 - -
Lal12g0072 654 Gene3D - 499 654 IPR015943 GO:0005515
Lal12g0072 654 PANTHER OS05G0299300 PROTEIN 570 652 - -
Lal12g0072 654 PANTHER OS05G0299300 PROTEIN 1 553 - -
Lal12g0072 654 ProSiteProfiles Trp-Asp (WD) repeats profile. 375 416 IPR001680 GO:0005515
Lal12g0072 654 SUPERFAMILY WD40 repeat-like 371 651 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0072 K24760 - gmx:100788591 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0072 12 465660 471339 Lal12g0072 12 465660 471339 ECH