Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0049 ATGCTCAAGTTATGGAACAAGAAGAACAAGATCAAAGCTATTTTCAAATTGGATTTTCAGGCAACTCAGGTGCCAAAGATGAAAAAGTCTGCATTAATGGTATCTTTGGTGCCAGATGATGTTGGAAAGCCAAGAGTGAAACTAGAGAAAACTGCTGTTCAGGATGGAATCTGCTTATGGGAAAATCCAGTTTTTGAATCAGTTAAACTTGTTAGGGATTCAAAATCAGGAAAGTTACATGAGAAAATCTACCATTTCATTGTTTCAACTGGATCTTCAAAATCTGGCTTTCTAGGAGAAGCCTCAATTGATTTTGCTGATTTTGTAGCAGAAATTGAGCCACTTACTGTTTCTCTACCCCTAAAGTTTGCCAATTCAGGCATAGTTTTACATTTTGTTTCAGTTTGTTTTTATCACTTTGGAGTTGAGATACCGATAAACATCGCATCTAGGTTGTGGGTGACAATTCAGAATGTGGAAGGATATACAGCTGAAAGAGATGGGGAAGATAATGAATCTGTGGGACTTTACAATGATGGAAGCTTGAAAAATCAATTGAGCTTTTGCAGTGTAGATGAAAGTTATTATATTAATGAAAATGAGCCTAATTCAGTGACATCACAAGGACCTGTTGAGGCCATTGATAAAGAAGCTCAAGTGCCTAAGAGGTCAAATACAGATTGGTCAACGGGTTCGGCATCAGATGGAAGTTTAGGTGACTGGAAAAACAGCCTAGAAGATAATCTTCCAAGAGAAAGATTAAAAGAGCCTTCAGATGATAATAATGCAACCGAAACGCTAAAAAATGAAATTGCTTCTCTAAAGAGGCAGGTAGAATCATCAGAACTCGAGTTACAGTCACTTCGGAAGCATATAGAAAAAGAAAGCATTAGGGGACAGAATTTGTCAAGTCAAATAAACCGCCTCAGAGATGAGAGAGACTTTCTTGAAACTAAATATGAGCAACTCAAGTCCCAGCAGAACAACAACAATCAGAACAAAGCCTCAAAAACATTGATGTCTGAGATTGATGACACTAGACTACAGTTAGAGGCAATAAAAGAAGAGCTTGTTTATGAAAAAGAGTTGAGTGCCAATCTTCAATTGCAACTGCACAAGACACAAAACTCAAATTCTGAGCTACTTGTGGCTGTGATGGACTTTGAAGTAATGCTGGAACAAAGGAATAAGGAAATATTGGATCTATCCACCAATATAAAATCTCGAGGCATTAATAAAGAGCATAATGATGCCTCAGAATTAGATCTTTTGAAGCATAAAATTGCAGACCAGAATCATGAACTGGACATTTGTTATAAGCAACATGAAGAGCTAAATGGCGAAATAAAAGAGCTCAGCTTGGATTATGAGCGTCTAAAGAAAGAAAACATGGATGTCTCTTTGAGATTAAAGCAAGGAGAAGCACAACAAATTATGTTACAAAATGAACATTCAGCTGCTTTGGCTACTATACAACAACTCGAATCACAAGTTCACAGATTAAAAGAAAAGGTAAAGACGCAGGAAGATGAGATTTCAGAATCATTGTTCTGCATCAATGAACTTGAAAATGAGGTGAAGTCTTTGCAGAAGGAACTAAAAATACAAACAGAAAATTTTGAATGTGATCTCAATGCCATGCAATGTGCAAAGGTTGAACAGGAAGAACGTGCCGTCCAAGTTGAGGAGGCCTTGAGAAAGGCGAGACACAATAATGATATCACATCTGAGCGGTTTCAGGAGGAATATCGAATTCTTTCAATTGAGATGTCTTCAAAAGTTGAGGTGAACGAAAAGATGACCATGAAAGCAGTTGAAGAAGCTGATGAGCTGCGACAGAAAAACAGACTAATAGAAGAGATGCTCCAGAAATGCAATCAAGAGCTCAGGCTTATTACAGATCAGAATCAATTGAAACTGCAACAACTATTGGACCAAATAGATTCAAAAGGAAAAACAATAGAACAGATGTCACAGGAGCTAGAAGTTAAGTCTAAACAACTTAATGAGGCAGAAAGACACAGTGATGAAAAGGATGCTGCATTCTCAAAGCAAATTCAAATGCTCGGATCAGAAATTAAAAAGCTGATGGCAGAGGAGTATGTTTTGTCTAAACCGAAACCGACAAAGAACATAACCAAGATGGAAAGGACAGATCCAGAAACAACATGTGTAGTAGAAACCATACTGTCAGAAGTAGAAACCTTTAAGATCCAACACAATGAAGTAAAACATAGTTTACACAAAGAGCAAGTGGAAAAAGAAAGTATGAAGAAACAGATATCTCAATTGGAAGGAGAGCTAAAGAAGAAGGAAGCAGAATTAAGTGATATGGAAAAGAAGCTTAAGAATAACAAAGGACGAGCAGCAATTTCACATATGAATTTAACTTCAAGAGACGACGAGTGTGCTGCATCTCCTTCCGCTAAAGCACATATTAAAAAGCTGAAATCTGAAATGCACAAGGTAATTGTTCAGCTACCATATTTAAAATCAGAAGTTAAGAAAATTAATATTGATTTTTAA 2526 0.3678 MLKLWNKKNKIKAIFKLDFQATQVPKMKKSALMVSLVPDDVGKPRVKLEKTAVQDGICLWENPVFESVKLVRDSKSGKLHEKIYHFIVSTGSSKSGFLGEASIDFADFVAEIEPLTVSLPLKFANSGIVLHFVSVCFYHFGVEIPINIASRLWVTIQNVEGYTAERDGEDNESVGLYNDGSLKNQLSFCSVDESYYINENEPNSVTSQGPVEAIDKEAQVPKRSNTDWSTGSASDGSLGDWKNSLEDNLPRERLKEPSDDNNATETLKNEIASLKRQVESSELELQSLRKHIEKESIRGQNLSSQINRLRDERDFLETKYEQLKSQQNNNNQNKASKTLMSEIDDTRLQLEAIKEELVYEKELSANLQLQLHKTQNSNSELLVAVMDFEVMLEQRNKEILDLSTNIKSRGINKEHNDASELDLLKHKIADQNHELDICYKQHEELNGEIKELSLDYERLKKENMDVSLRLKQGEAQQIMLQNEHSAALATIQQLESQVHRLKEKVKTQEDEISESLFCINELENEVKSLQKELKIQTENFECDLNAMQCAKVEQEERAVQVEEALRKARHNNDITSERFQEEYRILSIEMSSKVEVNEKMTMKAVEEADELRQKNRLIEEMLQKCNQELRLITDQNQLKLQQLLDQIDSKGKTIEQMSQELEVKSKQLNEAERHSDEKDAAFSKQIQMLGSEIKKLMAEEYVLSKPKPTKNITKMERTDPETTCVVETILSEVETFKIQHNEVKHSLHKEQVEKESMKKQISQLEGELKKKEAELSDMEKKLKNNKGRAAISHMNLTSRDDECAASPSAKAHIKKLKSEMHKVIVQLPYLKSEVKKINIDF 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0049 841 Coils Coil 747 788 - -
Lal12g0049 841 MobiDBLite consensus disorder prediction 217 265 - -
Lal12g0049 841 Coils Coil 544 571 - -
Lal12g0049 841 MobiDBLite consensus disorder prediction 245 263 - -
Lal12g0049 841 ProSiteProfiles C2 NT-type domain profile. 3 139 IPR019448 -
Lal12g0049 841 Coils Coil 604 628 - -
Lal12g0049 841 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 132 - -
Lal12g0049 841 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 152 822 - -
Lal12g0049 841 Coils Coil 640 674 - -
Lal12g0049 841 MobiDBLite consensus disorder prediction 223 241 - -
Lal12g0049 841 PANTHER BNAC08G20130D PROTEIN 1 132 - -
Lal12g0049 841 PANTHER BNAC08G20130D PROTEIN 152 822 - -
Lal12g0049 841 Coils Coil 336 356 - -
Lal12g0049 841 Coils Coil 264 333 - -
Lal12g0049 841 Coils Coil 442 476 - -
Lal12g0049 841 Coils Coil 484 539 - -
Lal12g0049 841 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 132 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0049 Lal-Chr12 333333 343445 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0049 - - gmx:100782613 1082.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0049 12 333333 343445 Lal13g0037 13 250994 257802 ECH
Lal12g0049 12 333333 343445 Lal12g0049 12 333333 343445 ECH