Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0045 ATGATGGCAACACGAAATGAGGTTGTGAATACATACCCACTTTCCAGTTACACCTTCGGTACCAAGGAGCCTAAGATGGAGAAGGATACTTCTGTCGCTGATCGTCTCGCTCGAATGAAACTCAACTACATGAAAGAAGGAATGAGGACTAGCGTGGAAGGAATTTTACTTGTACAAGAACACAATCACCCTCACATTCTTCTTTTGCAAATCGGAAACACATTCTGCAAACTCCCTGGTGGTCGTCTCAAACCGGGAGAGAATGAAACTGAGGGCTTGAAAAGAAAGCTAACTAGCAAGCTTGGTGCCAATTCTCCAGCTCTTGTACCTGACTGGCAGATAGGTGAGTGTGTGGCAACCTGGTGGAGGCCAAATTTTGAAACCATAATGTATCCATACTGCCCTCCTCATATAACAAAACCGAAGGAGTGCAAAAAGCTTTTCATTGTTCACTTGTCCGAGAGGGAATACTTTGCAGTGCCAAAAAATCTAAAATTGCTCGCTGTTCCATTGTTTGAACTTTATGACAATGTGCAGAGATATGGACCAGTTATATCCACCATTCCTCAACAGCTTTCCAGATTTCAGTTTAAAATGATCACTAATTGA 609 0.4253 MMATRNEVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEGILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENETEGLKRKLTSKLGANSPALVPDWQIGECVATWWRPNFETIMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFQFKMITN 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0045 202 ProSiteProfiles Nudix hydrolase domain profile. 48 173 IPR000086 -
Lal12g0045 202 PANTHER PRE-MRNA CLEAVAGE FACTOR IM 25 KDA SUBUNIT 2-LIKE 6 184 - -
Lal12g0045 202 Pfam Nucleotide hydrolase 8 195 IPR016706 GO:0003729|GO:0005849|GO:0006378
Lal12g0045 202 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 7 199 - -
Lal12g0045 202 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 6 184 IPR016706 GO:0003729|GO:0005849|GO:0006378
Lal12g0045 202 PIRSF CPSF-25 1 202 IPR016706 GO:0003729|GO:0005849|GO:0006378
Lal12g0045 202 SUPERFAMILY Nudix 55 154 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0045 Lal-Chr12 317264 319518 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0045 K14397 - gmx:100306068 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0045 12 317264 319518 Lal12g0045 12 317264 319518 ECH