Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0032 ATGGGTTGGTGGTTGAAGCAATTTACATTGGCATTTCTTGCTTGGAGCCTGATTTTTAATGGCTTGTCTTATTCTGAACAAGTTCCAAAATATACATTTATGAAAGATGCAACAACTGCTCCACCAATCTTATCTTATGACTATATAATAATTGGTGGAGGAACATGTGGGTGTCCACTAGCAGCAACACTGTCACAAGGTGCCAGAGTTTTGGTTCTTGAAAGGGGAGGCTCTCCTTACATAAACCCAGAAAAAATAGACATAAACAACTTTGTTAATTCCCTCTCTGACATAACCCCTTCATCATTTGCCCAACAATTCATATCCAGGGATGGAGTCCTCAATGCCAGGGCACGTGTCCTTGGTGGTGGCTCTGTCTTGAATGCAGGGTTCTACTCAAGAGCTAGCTCAAAGTACATAAGGGAATCTGGTTGGAATGAGACATTGGCTAAGGAGTCATATAAATGGGTTGAAAAGAAGGTTGTATTTGAGCCTCCAATGCTGCAATGGCAATCAGCAGTGAGGAATGGACTACTTGAAGTAGGGGTGTTGCCTTACAATGGTTTTAATCTTGATCATATGTATGGGACTAAGGTTGGTGGCACAATTTTCGATAAGGATGGTAACAGGCACACTGCAGCTGATTTGTTAGAGTATGCTCAACCAAGGAGGATTTCTGTTTATTTGCATGCCACTGTGCATAAGATACTCTTCAACTATAACACAGAAAAAAGGAGACCACAAGCTTATGGAGTAATTTTCAAAGATGCATTTGGAATAATGCATAGAGCATACTTAAACAAGAAATCAAAGAATGAGATAATCTTATCAGCTGGTGCAATTGGAAGCCCACAGTTGCTAATGCTCAGTGGCATAGGTCCTGCTAGTCATCTTCATGTTCATGGAATCAAAGTAATATTGGATCAGCCCTTAGTGGGTCAAGGGATGGCAGATAATCCAATGAATGTTGTAGTGGTTCCTTCCCCCGTACCTGTTGAAGTCTCTTTGGTCCAAACAGTGGGTATTACTAGGTTTGGTTCTTTTATTGAAGCAGCAAGTGGATTGAGCTTTGGACATTCTTGGTCTGAAAGGCTTCAAGGGATTTTTGAATTTGTGTCAAACCGGACCCTCCAACACTCCATGTTTGCTACAAAAGCCAAGGAGAGTATTGCAGACACCATTGGATCATTAACCAATCCAACTCTTAAAGGAGGAGTTATACTTGAAAAGATCATGGGACCTCGTTCAACAGGCCATCTAGAACTCTTAACCAATAACCCCAATGATAATCCTTCAGTTACCTTCAACTATTTTAAGGATCCAGCAGACCTAAGAATGTGTGTGGAAGGCATGAAGACCATAATAGATGTGATAAACTCCAATGCATTCTCAAAGTTCAGGTATCACAATATGCCAGTCCAAGCACTAATAGACTTTATGTTACACATACCAATGAACTCTAGGCCTAAACATTCAAGTGCTGCCTATTCTTTAGAACAATATTGCATAGACACTGTGTTAACAATTTGGCATTACCATGGAGGTTGCCAATCTGGTAAGGTTGTTGATCATAATTTCAAGGTTATTGGTGTGGAAGCTCTTAGAGTAATTGATGGATCAACCTTTTATCGCTCTCCGGGGACTAATCCTCAAGCTACTGTTATGATGCTTGGAAGGTATATGGGAGAAAAGATTTTAAAGAAAAGATTCTTTCCTTGGAAAAAGTGA 1728 0.4034 MGWWLKQFTLAFLAWSLIFNGLSYSEQVPKYTFMKDATTAPPILSYDYIIIGGGTCGCPLAATLSQGARVLVLERGGSPYINPEKIDINNFVNSLSDITPSSFAQQFISRDGVLNARARVLGGGSVLNAGFYSRASSKYIRESGWNETLAKESYKWVEKKVVFEPPMLQWQSAVRNGLLEVGVLPYNGFNLDHMYGTKVGGTIFDKDGNRHTAADLLEYAQPRRISVYLHATVHKILFNYNTEKRRPQAYGVIFKDAFGIMHRAYLNKKSKNEIILSAGAIGSPQLLMLSGIGPASHLHVHGIKVILDQPLVGQGMADNPMNVVVVPSPVPVEVSLVQTVGITRFGSFIEAASGLSFGHSWSERLQGIFEFVSNRTLQHSMFATKAKESIADTIGSLTNPTLKGGVILEKIMGPRSTGHLELLTNNPNDNPSVTFNYFKDPADLRMCVEGMKTIIDVINSNAFSKFRYHNMPVQALIDFMLHIPMNSRPKHSSAAYSLEQYCIDTVLTIWHYHGGCQSGKVVDHNFKVIGVEALRVIDGSTFYRSPGTNPQATVMMLGRYMGEKILKKRFFPWKK 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0032 575 PANTHER OSJNBA0019K04.7 PROTEIN 5 569 - -
Lal12g0032 575 Gene3D - 46 558 IPR036188 -
Lal12g0032 575 ProSitePatterns GMC oxidoreductases signature 2. 279 293 IPR000172 GO:0016614|GO:0050660
Lal12g0032 575 SUPERFAMILY FAD/NAD(P)-binding domain 43 569 IPR036188 -
Lal12g0032 575 Pfam GMC oxidoreductase 46 320 IPR000172 GO:0016614|GO:0050660
Lal12g0032 575 Pfam GMC oxidoreductase 414 559 IPR007867 GO:0016614
Lal12g0032 575 PIRSF Alcohol_oxidase 24 570 IPR012132 GO:0050660
Lal12g0032 575 SUPERFAMILY FAD-linked reductases, C-terminal domain 316 515 - -
Lal12g0032 575 Gene3D - 163 508 - -
Lal12g0032 575 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 5 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0032 Lal-Chr12 244057 246845 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0032 16 569 Miscellaneous Gene Families AT5G51950 60.357 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0032 - - gmx:100780453 960.674
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0032 12 244057 246845 Lal12g0032 12 244057 246845 ECH