Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1347 ATGGGTGGTAGTGGTAGTGATGGTATGATAATGGTGTGGGAAGATCTAACAGTGGAGCTTCCTATATTTGGAGAAGAAGATTCATCATTTTCTTCAAAGAAGAAGAAGAAGCTGCTTAATGGACTCACTGGTTTGGCTCAACCTGGTAAGATTATGGCTGTCATGGGTCCTTCTGGCTCTGGCAAAACCACCCTACTTCACTCTTTCTCAGGAAGACTTCCTCCAAATGTTATAGTGACAGGTAGCATTTTAATGAACAGGAAGAAGACAAACTCATACTGCAAAGAAGTCTCTTATGTTGCTGAAGAGGAAATGTTCTTGGGAACTTTGACAGTAAGAGAAACTCTGACATACTCAGCAAACATTAGGCTTCCTTCAAAAATGAGTAAAGAAGAGATAAATAATGTGGTTGAAGAAACAATAATGAAATTGGGTCTTGAAGAATGTGCAAATAATACCATTGGTAATTGGCATTTAAGGGGTATTAGTAATGGTGAAAAGAAGAGAGTTAGTATTGGCCTTGAGATTTTGACACAACCCCATGTCTTACTTCTTGATGAACCTACTAGTGGACTTGATAGTGCCTCAGCTTTCTATGTAATTCAAGCTCTAACCAACATAGCTTCTAATGGAAAGATAGTTATCTGTTCCATTCATCAGCCAAGTAGTGAAATTTTTAATCTTTTTGATCATCTTCTCTTGCTCTCAAATGGGGAAACTGTTTATTTTGGAGAAGCAAACATGGCTCTAAAGGAAGCATCATCATCATATTCTGCTGTGGGCATGAGAACAGCAGAAATTAGAGCAACACTCATTGAAAGTTACAAATGTTCAGAGCTAATGATCAATTCAAGAAACAGAATTCAAATGCTACAACCCAATTTGTTCTATGCTGAAAGGTCAAAAGGGCATTATGGAGAGGCTGCATTTGTTCTAGCAAACATTATATCATCATTCCCTTTCCTTCTTGTGATATCACTATTCTCTGGAGTAATTATATACTTCATGGTACAATTTCATCCTGGTGCAACTAATCTTGCATTTTTCTGCATCAACTTATTCTGTTGCCTTTCGGTTGTTGAGAGCTGCATAATGATTGTAGCCTCATTAGTCCCCAATGTTTTGATGGGTATAGGAACAGGAACTGGTGTAATAATTTTCATGATGATGCCCTCTCAAATCTTCAGACGTCTACCCGATATTCCAAAGTTCTTTTGGCGCTATCCGATGTCATACCTCAGTTTTGCTACTTGGGCAATGCAGGGACAGTATAAAAATGACATGCTAGGCCTTGAATTTGATCCTCTGCTACCTGGGTACCCAAAAGTTAGTGGAGAACAAGTCCTAACAATGTCATATGTTACTCAAGAAGATTATTTCTTGGGAACTTTAACAGTGAGGGAAACCCTCACATATGCTGCACATTTGAGGCTTCCTTCTAATATGACAAAAGATGAGATTAATAAGATGGTAACCAAGATATTGGATGAGATGGGTTTGCAAGATTGTGCTGATTGCAGAATTGGAAATTGGCATTTGAGAGGGATAAGTAATGGAGAGAAGAGAAGACTTAGCATAAGCATTGAGATCTTAACTCAACCTCATATATTACTTCTTGATGAACCCACTAGTGGGTTAGATAGTGCAGCTTCTTTTTATGTCATATCATCTCTGAGAAGCATTGCACATAATGGAAGAATAGTTATCTGCTCCATTCATCAACCTTGTAGTGAAGTGTTCAATCTTTTTGATGATCTATTCCTCCTTGCAGCAGGTGAAACTGTGTTTTTTGGAGAAAGAACTATGGCTGTAAAGTTCTTCGCAGATGCTGGGTTTCCTTGTCCAACAAGAAAAAATCCCCCGGAGCATTTCCTTCGTTGTATTAGCGCAGAGTTCGATAGTGTTGCAACCTTAATACAGTCCAGAAATATCAAAGCAGCTTCATCATCTTGGAATCCCTCAATGAATAAGACAACCGAGGAGATTAAATCTGAACTTATAAAGAACTACAAGAATTCCATGCATTCAGCAAAGGCAAGGGAAAAAATCAGAGAAATCAAGCAAAGAGAAGTACCTTTGATTGGGAGGACATATGATACTAGCATGCTGAAGCAACTATGCACCTTGACACAAAGATCATTCCTGAATATGTTTAGAGACATTGGTTACTGCTGGTTAAGGATTGTATTCTACATCTTGGTATCAGGGAGTGCTGGTTTTCTTTATCTCAACATAGGAACTGGTTCTGGAGCAATCTTGTCAAGAGGCAAGTGTGATGGATTCATCTATGGCTTTATGGCCTTCCTTTGTTTAGGTGGCTTACCCTTCTTCCTTGAGGAATTAAAGGTCTTCAAACGTGAAAGGTTTGGGAGGCATTATGGTGAGGCTGTCTATGTGCTATCAAGTTTCCTCTCATCATTCCCTTTTGTTCTTGCAATTTCCCTCTCTTCAGGAACAATACTTTACCACATGATGAACTTTCACCCAGGCTTCTCTCATTACTTTTATTTTTGCATAAACCTGCTTTGCTGCATATCTGTCACAGAAGGCTGCATGCTACTTGTAGCAGCACTTGTGTCCAATTTATTGCTAGCCATAGGAACTGCCACTGGTATAATTGGTCAGTTCAAGAATGACCTAATTGGACTTGAATTTGAACCACTAGTGCCAGGGGATGCTAAGATAAAGGGTGAAGTGATACTTCAGGAAACATATGGAATTTCAACTGATTATTCAAAATGGTGGGACTTAGGAGCTATAGTTTGCTTATTAATATCATATAGACTGCTCTTTTTCTTGGTTCTTAAGCACAAGGAGAGAGTCACATCTCTGTTACACATCAAAAGGACTTTCCTAGATATTTTCCTCAGAAGACATTCATTAAAGGACAAATATATTTCTTCCAAGAGGCACCAATCCCTGTATCCTTTGTCAGCTCAAGAGGGTCTTAGTTCTTGA 2958 0.3878 MGGSGSDGMIMVWEDLTVELPIFGEEDSSFSSKKKKKLLNGLTGLAQPGKIMAVMGPSGSGKTTLLHSFSGRLPPNVIVTGSILMNRKKTNSYCKEVSYVAEEEMFLGTLTVRETLTYSANIRLPSKMSKEEINNVVEETIMKLGLEECANNTIGNWHLRGISNGEKKRVSIGLEILTQPHVLLLDEPTSGLDSASAFYVIQALTNIASNGKIVICSIHQPSSEIFNLFDHLLLLSNGETVYFGEANMALKEASSSYSAVGMRTAEIRATLIESYKCSELMINSRNRIQMLQPNLFYAERSKGHYGEAAFVLANIISSFPFLLVISLFSGVIIYFMVQFHPGATNLAFFCINLFCCLSVVESCIMIVASLVPNVLMGIGTGTGVIIFMMMPSQIFRRLPDIPKFFWRYPMSYLSFATWAMQGQYKNDMLGLEFDPLLPGYPKVSGEQVLTMSYVTQEDYFLGTLTVRETLTYAAHLRLPSNMTKDEINKMVTKILDEMGLQDCADCRIGNWHLRGISNGEKRRLSISIEILTQPHILLLDEPTSGLDSAASFYVISSLRSIAHNGRIVICSIHQPCSEVFNLFDDLFLLAAGETVFFGERTMAVKFFADAGFPCPTRKNPPEHFLRCISAEFDSVATLIQSRNIKAASSSWNPSMNKTTEEIKSELIKNYKNSMHSAKAREKIREIKQREVPLIGRTYDTSMLKQLCTLTQRSFLNMFRDIGYCWLRIVFYILVSGSAGFLYLNIGTGSGAILSRGKCDGFIYGFMAFLCLGGLPFFLEELKVFKRERFGRHYGEAVYVLSSFLSSFPFVLAISLSSGTILYHMMNFHPGFSHYFYFCINLLCCISVTEGCMLLVAALVSNLLLAIGTATGIIGQFKNDLIGLEFEPLVPGDAKIKGEVILQETYGISTDYSKWWDLGAIVCLLISYRLLFFLVLKHKERVTSLLHIKRTFLDIFLRRHSLKDKYISSKRHQSLYPLSAQEGLSS 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1347 985 Pfam ABC-2 type transporter 705 873 IPR013525 GO:0016020|GO:0140359
Lal11g1347 985 Pfam ABC-2 type transporter 293 422 IPR013525 GO:0016020|GO:0140359
Lal11g1347 985 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 354 616 IPR003439 GO:0005524
Lal11g1347 985 Pfam ABC-2 type transporter 573 686 IPR043926 GO:0140359
Lal11g1347 985 Pfam ABC transporter 44 190 IPR003439 GO:0005524
Lal11g1347 985 Pfam ABC transporter 451 544 IPR003439 GO:0005524
Lal11g1347 985 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 249 IPR027417 -
Lal11g1347 985 Gene3D - 439 609 IPR027417 -
Lal11g1347 985 Gene3D - 20 286 IPR027417 -
Lal11g1347 985 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 23 262 IPR003439 GO:0005524
Lal11g1347 985 SMART AAA_5 48 239 IPR003593 -
Lal11g1347 985 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 253 294 - -
Lal11g1347 985 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 451 873 - -
Lal11g1347 985 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 9 251 - -
Lal11g1347 985 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 295 451 - -
Lal11g1347 985 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 872 947 - -
Lal11g1347 985 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 295 451 - -
Lal11g1347 985 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 872 947 - -
Lal11g1347 985 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 9 251 - -
Lal11g1347 985 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 451 873 - -
Lal11g1347 985 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 253 294 - -
Lal11g1347 985 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 450 601 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1347 Lal-Chr11 17030191 17042373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1347 27 320 Calmodulin-binding Proteins AT2G36910 24.759 2.41e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1347 - K05681 aip:107646291 771.155