Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1262 ATGGCATGCTCTGCTCCTTCTATCCTCACTTCAAACCCTAATTCCTTTTTCTCTCCCAAATCCCTTTCTTCAACTTTTCCACTCTCTTCTCTCTCCTTCTCCACCGTTCCCCTCCGCACCAAACCTCTTCGCACTTCTCTCTCTCCTCGCTCCACATTCCTCCTCAGAGCCACTTCCAGTGAGTTTCCGTTAGTTGGAAATACAGCACCTGATTTTGAAGCTGAAGCGGTTTTTGATCAGGAATTTATCAACGTCAAACTATCTGAATACATTGGGAAGAAATACGTTATTCTCTTTTTCTATCCGTTGGATTTCACATTTGTTTGTCCCACAGAAATCACCGCTTTCAGCGACCGGCATGCAGAGTTTGAGGAACTAAATACAGAGATATTGGGTGTTTCCGTTGACAGTGTGTTTTCGCACCTTGCATGGGTTCAAACTGATAGAAAGTCAGGTGGTCTTGGTGACTTGAAGTATCCTTTGATTTCTGATATCACCAAATCCATATCAAAATCTTATGGTGTTCTCATTCCTGATCAGGGGATTGCATTGAGAGGATTGTTCATCATTGACAAGGAAGGGGTTATCCAGCATTCTACCATTAATAACCTTGGAATTGGTAGAAGTGTTGATGAGACAAAGAGAACACTCCAGGCCTTGCAGTATGTGCAAGAGAACCCAGATGAAGTTTGCCCTGCTGGATGGAAGCCTGGTGAGAAGTCAATGAAACCAGACCCTAAACTTAGCAAAGAGTACTTTGCAGCTGTGTAA 771 0.4345 MACSAPSILTSNPNSFFSPKSLSSTFPLSSLSFSTVPLRTKPLRTSLSPRSTFLLRATSSEFPLVGNTAPDFEAEAVFDQEFINVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRHAEFEELNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLKYPLISDITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFAAV 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1262 256 Pfam C-terminal domain of 1-Cys peroxiredoxin 219 253 IPR019479 GO:0051920
Lal11g1262 256 Gene3D Glutaredoxin 57 256 - -
Lal11g1262 256 CDD PRX_Typ2cys 65 238 - -
Lal11g1262 256 Pfam AhpC/TSA family 65 198 IPR000866 GO:0016209|GO:0016491
Lal11g1262 256 ProSiteProfiles Thioredoxin domain profile. 63 222 IPR013766 -
Lal11g1262 256 PANTHER THIOREDOXIN PEROXIDASE 41 256 - -
Lal11g1262 256 PANTHER 1-CYS PEROXIREDOXIN PER1 41 256 - -
Lal11g1262 256 SUPERFAMILY Thioredoxin-like 63 254 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1262 Lal-Chr11 16302922 16306305 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1262 K03386 - gmx:100786990 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1262 11 16302922 16306305 Lal11g1262 11 16302922 16306305 ECH
Lal11g1262 11 16302922 16306305 Lal20g0187 20 1302385 1306030 LSH