Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1244 ATGACGACGGAACTGTTGCAGTTACCTTCACTGGGTTCCTATGGAGGACACGATGCCCTTATTAACGACACCAACCCTACACAAGAAGAAGAAGAAGAAGAAGAAGAAAGGGTTAATAGAGAAAGAGATCAACTTTCGTTTTTAACCCTATTTATTGATACGTTTAAGAAATCTGTAATTGGTACTTGCACTAACACTGATTTCTCTTCTTCTTCAATGGAAATTGGTTGGCCTTCTAATGTTAGACATGTTGCACATGTTACCTTTCATCGATTCCATGGTTTTCTTGGTTTGCCTCTTGAATTTCAACCTCAATTACCTCCTACTCCTCCTAGCGCAAGTGCAAGTGTTTTCGGGGTTTCAACAGAGTCTATGCAGCTTTCTTTTGATGCTAGAGGGAATAGCGTACCTACAATATTGCTGTTAATGCAAAGACATTTATATACGCAAGGAGGTCTGCAGGCCGAAGGAATCTTCCGAATTAATGCTGAAAATGGTCAAGGGGAGTTTGTAAGGGAACAATTAAACAGAGGAGTAGTACCAGATGGCACAGATGTGCACTGTTTGGCAGGTCTTATAAAGGCTTGGTTCAGAGAACTTCCAACTGGGGTATTGGACCCTCTTTCACCGGAGCAGGTGATGCAGTCCCAGTCAGAAGAAGAATGTGCTCAGCTTGTGAGGCTTCTTCCTCCGACAGAAGCTGCTCTGTTAGATTGGGCAATAAACCTGATGGCTGATGTTGCTCAACTGGAACATTTGAACAAGATGAATGTACGCAATGTTGCAATGGTTTTTGCTCCAAACATGACTAACATGGTGGATCCTTTGACTGCTTTGATGTATGCCGTACAAGTCATGAATTTTCTCAAGACTCTTGTCGAGAAGGCGCTGAGAGAAAGAGAAGAATCTATGGGAAAATCAGATCCCATTTCAAACCTAAATTATTTTGATGACGATGGGCACCATAGCTCTTCAGAATGGATTCTCAAGGATGACAGTGAAAATGAAAATGATAGCAGTGAGGAGGATACATCATTTGTTACTGAAGAACCTTCTCAACAAAGCCCTATTCATGTTATTGAAGACGGCTACGAAACTGAAAGTGGATCGAAAAGTCTCTCAACTTCGGGAAAAAAATTTCCTGGAGAAAATAAGTTGCTGGTGGACAGTTGTCCTTGCAATGTTGTTTCTCAACTTACTAGCAGTCTGGCAAAGGAGAATCAAGCAAATATTTGCAAAAGCAAAAGTCTTCAGTTAAGTACTTATGATATGGTCAAGTGTTCTAAACTGTTGATTGAGCTTTCCGTAGCAGGACCCGCGGAGAAGAGCATGGGATCTGCAATTATTGGACGTATAAATTCAAGATCGGAGTTGACTGAAGCATGGCGCTGA 1392 0.4159 MTTELLQLPSLGSYGGHDALINDTNPTQEEEEEEEERVNRERDQLSFLTLFIDTFKKSVIGTCTNTDFSSSSMEIGWPSNVRHVAHVTFHRFHGFLGLPLEFQPQLPPTPPSASASVFGVSTESMQLSFDARGNSVPTILLLMQRHLYTQGGLQAEGIFRINAENGQGEFVREQLNRGVVPDGTDVHCLAGLIKAWFRELPTGVLDPLSPEQVMQSQSEEECAQLVRLLPPTEAALLDWAINLMADVAQLEHLNKMNVRNVAMVFAPNMTNMVDPLTALMYAVQVMNFLKTLVEKALREREESMGKSDPISNLNYFDDDGHHSSSEWILKDDSENENDSSEEDTSFVTEEPSQQSPIHVIEDGYETESGSKSLSTSGKKFPGENKLLVDSCPCNVVSQLTSSLAKENQANICKSKSLQLSTYDMVKCSKLLIELSVAGPAEKSMGSAIIGRINSRSELTEAWR 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1244 463 CDD CRIB 73 116 - -
Lal11g1244 463 Pfam RhoGAP domain 137 270 IPR000198 GO:0007165
Lal11g1244 463 MobiDBLite consensus disorder prediction 8 41 - -
Lal11g1244 463 Gene3D Rho GTPase activation protein 109 306 IPR008936 GO:0007165
Lal11g1244 463 SMART PBD_5 75 109 IPR000095 -
Lal11g1244 463 SMART RhoGAP_3 134 297 IPR000198 GO:0007165
Lal11g1244 463 SUPERFAMILY GTPase activation domain, GAP 115 294 IPR008936 GO:0007165
Lal11g1244 463 ProSiteProfiles Rho GTPase-activating proteins domain profile. 120 304 IPR000198 GO:0007165
Lal11g1244 463 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 25 463 - -
Lal11g1244 463 CDD RhoGAP 137 289 - -
Lal11g1244 463 PANTHER MKIAA1688 PROTEIN 25 463 IPR044785 GO:0005096
Lal11g1244 463 ProSiteProfiles CRIB domain profile. 75 88 IPR000095 -
Lal11g1244 463 MobiDBLite consensus disorder prediction 331 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1244 Lal-Chr11 16169014 16172731 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1244 - - gmx:100783118 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1244 11 16169014 16172731 Lal11g1244 11 16169014 16172731 ECH