Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1215 ATGGCCACTGAACTTAACATCATTAGCGGCGCAACTAACGGCGTCAATTCTGACGTCAAACTTGTACCCTCCGTTAACCCTGAGAAGCTCATTATCGATACCGACCCTGGGATCGATGATAGCATGGCGATCATGATGGCATTTCAAAGTCCAGAGGTGGAGATCTTAGGATTGACATCGATTTTTGGTAATGCTGCTACTGAAGATGCAACACGAAATGCCTTGGTTTTGTGTGAGATCGCAGGTCAACATATTCCAGTTGCAGAGGGAAGCCATGAACCTTTGAAGGGTGGAAAGCCTCGCATTGCTGATTTTGTTCACGGCAAAGATGGATTAGGGAACTTATTCTTGCCCTCACCTAAAGCCAACAAAATTGAGAAGAGTGCTAGTGAGTTTTTAGTTGAGAAGGTCTCAGAATATCCTGGTGAAGTATCTGTGCTAGCACTTGGACCATTGACAAATATAGCTTTAGCAATCAAAAGGGATTCTTCATTTGCAAGCAAGGTGAAGAGGATAGTCGTACTTGGTGGTGCATTCTTCGCCTTGGGTAATGTCAATCCTGCTGCGGAAGCAAATATCCATGGAGATCCCGAAGCTGCGGATACTGTGTTTACCTCTGGAGCAAATATTGTTGTTGTTGGAATAAACATTACAACCCAAGTCCAATTCACAGATGCTGATCTCCTTGCACTGAAGGAATCCAAAGGGAAGTATGCACCTCTCTTGAGTGATATGTGCAAATTCTACAGGGATTGGCATGTAAAATCTGACGGTGTTCATGGAATTTTCCTCCATGACCCTGTCAGTTTCGTGGCCGTTGTGCGTCCCGATCTTTTCACATACAAGAAGGGGGTGGTGAGGGTAGAGACACAAGGCCTCTGTGTTGGGCATACACTTATGGACCAAGGACTTAAAAGATGGAATACGAGCAACCCATGGACGGGTTATTCTCCGGTTTCGGTTGCTTGGACTGTGAATATAGAAGGAGTTCTTAATCATGTTAGGGAGTTGTTGATGAAACCTTGA 1026 0.4483 MATELNIISGATNGVNSDVKLVPSVNPEKLIIDTDPGIDDSMAIMMAFQSPEVEILGLTSIFGNAATEDATRNALVLCEIAGQHIPVAEGSHEPLKGGKPRIADFVHGKDGLGNLFLPSPKANKIEKSASEFLVEKVSEYPGEVSVLALGPLTNIALAIKRDSSFASKVKRIVVLGGAFFALGNVNPAAEANIHGDPEAADTVFTSGANIVVVGINITTQVQFTDADLLALKESKGKYAPLLSDMCKFYRDWHVKSDGVHGIFLHDPVSFVAVVRPDLFTYKKGVVRVETQGLCVGHTLMDQGLKRWNTSNPWTGYSPVSVAWTVNIEGVLNHVRELLMKP 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1215 341 Gene3D - 20 341 IPR036452 GO:0016799
Lal11g1215 341 PANTHER URIDINE NUCLEOSIDASE 1 24 341 - -
Lal11g1215 341 CDD nuc_hydro_CaPnhB 29 339 - -
Lal11g1215 341 Pfam Inosine-uridine preferring nucleoside hydrolase 30 330 IPR001910 GO:0016799
Lal11g1215 341 PANTHER INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE 24 341 IPR023186 -
Lal11g1215 341 SUPERFAMILY Nucleoside hydrolase 28 338 IPR036452 GO:0016799
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1215 Lal-Chr11 15906067 15909368 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1215 K01240 - gmx:100818908 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1215 11 15906067 15909368 Lal1g1766 1 20012122 20022004 LSH