Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1186 ATGTTGCGTTGTTTCGTTCCCCTCTTGTTATTCCTCTTAGCCACCGTGATTATGCCGGCAATAACGGCGGTGCACGGTGGTTTTGCGTGGAGTTATGTTCCTCTTGAACGAGTTATTCCTCTGAACCAAAGGGTGGAACTTGAAGCATTGAAAGCTCGAGATAGAGCAAGGCACACTCGAATCTTGGCTGATATTATTGACTTCTCTGTTCAAGGAACCTCTGATCCTTACTTCGTTGGGTTGTATTTTACTAAAGTGAAGATGGGTTCTCCTCCAAGAGAATTTAATGTTCAGATTGATACCGGGAGTGACATCTTGTGGGTTAATGGCAACACTTGCAGTAATTGTCCACAGTCTAGTGGGCTGGGGATTGAGCTCAACTATTTTGACACAGCCAGTTCATCCACTGCTGCGCTGCTTTCCTGCTCAGACCCAATATGCGCTTATGCGGTTCAAACTGCGACTAGTGGATGCCCCTCTCAAGATAGTCAGTGCAGATATACCTTTCAGTATGGAGACGGAAGTGGGACATCTGGTTATTATGTTTCTGATTTGATGTATTTTGACACGGTCGTAGGACACTCTATGCTATCGAATAGTTCAGCTACCATCATTTTCGGGTGTAGCACCTATCAGTCTGGAGATTTGACTAAGACAGAAAAGGCAGTTGATGGAATTTTTGGGTTTGGCCGTGGTGCTTTATCTGTTATATCACAGTTATCATCACGAGGCATAACGCCCAAAGTGTTCTCTCATTGCTTAAAAGGAGAGGGCAATGGAGGAGGCGTATTAGTTCTTGGTGAGATTTTGGAGCCAAATATAGTTTATAGTCCGCTTGTTCCATCACAGATCCATTACAACTTAAATCTCGAGAGCATTGCTGTCAATGGACAACTCCTCTCAATTGATCCAGCTGTATTTGCAACAGCTGACAACCAAGGAACTATAGTCGACACTGGTACAACATTGACATACCTTGTTCAAGATGCCTATGATCCTTTTGTCAGTGCTATAACTACTACTGTGTCCCAGTTTTCTAAACCCATTATTTCAAAAGGAAACCAGTGCTATTTAGTCGCAACCAGCCTCGGTGATATATTTCCTTCAGTCAGTTTAAACTTTATGGGAGGAGCATCCATGGTTTTAAAACCAGAACAGTACCTTATGCATTATGGTTTCCTTGATAGTGCTGCAATGTGGTGCATTGGCTTCCAGAAAGTGCAGCAGGGATTCACAATTTTAGGAGGTTCACTGTCCGTAAACGTCTCTCTGGTCACAAGCAAGAGCAAGGATGAGTACACCACCGATCCGGGACAGTTGAGTATCGGCTGCTCCAAAATAGGCATTCTAACCAAGTTGCTACCTGTAACCATTGTGGCTTTTCTTGTGCACATAATAGTTTCATGGAATCCCATTTTTTGTAACTGA 1428 0.4349 MLRCFVPLLLFLLATVIMPAITAVHGGFAWSYVPLERVIPLNQRVELEALKARDRARHTRILADIIDFSVQGTSDPYFVGLYFTKVKMGSPPREFNVQIDTGSDILWVNGNTCSNCPQSSGLGIELNYFDTASSSTAALLSCSDPICAYAVQTATSGCPSQDSQCRYTFQYGDGSGTSGYYVSDLMYFDTVVGHSMLSNSSATIIFGCSTYQSGDLTKTEKAVDGIFGFGRGALSVISQLSSRGITPKVFSHCLKGEGNGGGVLVLGEILEPNIVYSPLVPSQIHYNLNLESIAVNGQLLSIDPAVFATADNQGTIVDTGTTLTYLVQDAYDPFVSAITTTVSQFSKPIISKGNQCYLVATSLGDIFPSVSLNFMGGASMVLKPEQYLMHYGFLDSAAMWCIGFQKVQQGFTILGGSLSVNVSLVTSKSKDEYTTDPGQLSIGCSKIGILTKLLPVTIVAFLVHIIVSWNPIFCN 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1186 475 CDD pepsin_A_like_plant 82 415 IPR034161 -
Lal11g1186 475 PRINTS Pepsin (A1) aspartic protease family signature 88 108 IPR001461 GO:0004190|GO:0006508
Lal11g1186 475 PRINTS Pepsin (A1) aspartic protease family signature 315 326 IPR001461 GO:0004190|GO:0006508
Lal11g1186 475 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 7 417 - -
Lal11g1186 475 PANTHER ASPARTYL PROTEASES 7 417 IPR001461 GO:0004190|GO:0006508
Lal11g1186 475 Gene3D Acid Proteases 269 425 IPR021109 -
Lal11g1186 475 ProSiteProfiles Peptidase family A1 domain profile. 82 436 IPR033121 -
Lal11g1186 475 SUPERFAMILY Acid proteases 77 418 IPR021109 -
Lal11g1186 475 Gene3D Acid Proteases 64 268 IPR021109 -
Lal11g1186 475 Pfam Xylanase inhibitor N-terminal 82 267 IPR032861 -
Lal11g1186 475 Pfam Xylanase inhibitor C-terminal 285 418 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1186 Lal-Chr11 15633929 15639217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1186 79 389 Miscellaneous Gene Families AT1G44130 29.755 1.21e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1186 - - gmx:100804147 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1186 11 15633929 15639217 Lal11g1186 11 15633929 15639217 ECH