Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1176 ATGGCAGTAACATCAACCTCACTCTCTTCTCAACTCTACATTGGCCTTCAACGCCCCACCCCAAAGTTTGAATCTTTCACTTCTCAATCTTTCTTTGATTCCGTTCATTCCAATCTCCACCTCTCTATTTCTGCCCCCAAACGCTCCTCTTCCATCGTTGCTATGGCTTCTTCTGCCAAATTCTTTGTTGGTGGCAACTGGAAGTGTAACGGAACAAAAGACTCCATCAGTAAGCTTATCAATGACTTGAACAGTGCAAAATTGGAGCCTGATGTTGATGTTGTTGTTGCCCCTCCCTTCGTGTACATCGATCAGGTGAAAAGCTCAATTACAGACCGCATTGAAATATCTGCCCAGAATTCCTGGGTGGGAAAGGGTGGTGCTTTCACAGGAGAAATCAGTGTGGAACAACTGAAGGACCTTGGAGTCAAGTGGGTTATTCTGGGACATTCTGAGCGAAGACATGTTATTGGAGAAAAAGATGAGTTCATAGGAAAGAAAGCTGCCTATGCTTTGAGCGAGGGTCTTGGAGTGATAGCTTGCATTGGGGAACTATTGGAAGATAGGGAAGCTGGAAAAACTTTCGATGTTGTTTTCGAGCAGTTGAAGGCTTATGCAGATGTAGTGCCTAGTTGGGATAATATTGTTATTGCATATGAACCTGTATGGGCTATTGGAACTGGCAAAGTGGCTACACCCCAGCAAGCTCAGGAAGTGCATGTAGCTATCCGTGACTGGCTTAAAAAGAATGTCTCACCTGAAGTTGCATCTAAAACCCGTATTATTTATGGAGGGTCTGTAAATGGAGGTAATAGTGCTGAGCTTGCAAAAGAAGAAGATATTGATGGATTTCTTGTTGGTGGTGCTTCATTAAAGGGTCCAGAGTTTGCTGTCATTATCAATTCAGTAACATCCAAGAAAGTTGCAGCTTGA 933 0.4352 MAVTSTSLSSQLYIGLQRPTPKFESFTSQSFFDSVHSNLHLSISAPKRSSSIVAMASSAKFFVGGNWKCNGTKDSISKLINDLNSAKLEPDVDVVVAPPFVYIDQVKSSITDRIEISAQNSWVGKGGAFTGEISVEQLKDLGVKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLGVIACIGELLEDREAGKTFDVVFEQLKAYADVVPSWDNIVIAYEPVWAIGTGKVATPQQAQEVHVAIRDWLKKNVSPEVASKTRIIYGGSVNGGNSAELAKEEDIDGFLVGGASLKGPEFAVIINSVTSKKVAA 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1176 310 SUPERFAMILY Triosephosphate isomerase (TIM) 55 303 IPR035990 GO:0004807
Lal11g1176 310 CDD TIM 61 301 IPR000652 GO:0004807
Lal11g1176 310 ProSiteProfiles Triosephosphate isomerase (TIM) family profile. 60 302 IPR000652 GO:0004807
Lal11g1176 310 Gene3D Aldolase class I 39 309 IPR013785 -
Lal11g1176 310 TIGRFAM tim: triose-phosphate isomerase 62 292 IPR000652 GO:0004807
Lal11g1176 310 PANTHER TRIOSEPHOSPHATE ISOMERASE, CHLOROPLASTIC 1 308 - -
Lal11g1176 310 ProSitePatterns Triosephosphate isomerase active site. 218 228 IPR020861 GO:0004807
Lal11g1176 310 Pfam Triosephosphate isomerase 62 302 IPR000652 GO:0004807
Lal11g1176 310 PANTHER TRIOSEPHOSPHATE ISOMERASE 1 308 IPR000652 GO:0004807
Lal11g1176 310 Hamap Triosephosphate isomerase [tpiA]. 59 302 IPR022896 GO:0004807|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1176 Lal-Chr11 15517697 15522908 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1176 K01803 - gmx:100819824 516.153