Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1172 ATGCACCTTACTTTTAAGCACTTTATACCTCAGTTTCTCTCTGCATTTAAAAACAACATAACCATTCTCCTTTCTGCTTATACACACTTCATTATGTCTTTCTTTCTCTTTGTCATTTTAATCTTAATGGTCCCTTCAAGCAATGCTTATTGGCCACCTTCACCTGGCTACTGGCCAAGTTCCAAATTCAGGTCTTTAAGCTTTTACAAAGGTTTTACAAATCTTTGGGGCCCTCAGCACCAAAGACTAGACCAACATGCATTAACAATTTGGCTTGACAGAACCTCAGGAAGTGGCTTCAAATCAGTGAGGCCATTTAGATCTGGGTACTTTGGTGCTTCTATTAAGCTCCAACCTGGTTATACTGCAGGAGTTATAACAGCTTTCTATCTTTCAAATAATGAAGCACACCCTGGATTCCATGATGAAGTAGACATTGAGTTTCTTGGGACCACATTTGGAAAGCCTTATACTTTGCAGACAAATGTTTATATAAGAGGGAGTGGTGATGGGAAGATTATAGGAAGAGAGATGAAATTTCATTTATGGTTTGATCCTACCAAAGATTTTCATCACTATGCTATATTGTGGAGTCCTAAGGAAATAATATTCCTTGTTGATGATGTGCCAATAAGAAGGTACACAAGGAAGAGTGATGCAACATTTCCACTAAGACCAATGTGGCTTTATGGTTCAATATGGGATGCATCATCATGGGCAACAGAAGATGGAAAGTACAAAGCAGATTATAGATACCAACCTTTTATAGCAAAGTATACCAATTTCAAAGCTAGTGGTTGCACAGCTTATGCACCAAGATGGTGCCATCCAGTTTCAGCATCACCATATAGGTCTGGTGGGTTGACTCCACAACAAAATGGGGCCATGAGATGGGTTCAAAGGTACCACATGGTTTACAACTATTGTCAAGATTCCAAAAGAGATCATAGACAAACACCTGAATGTTGGGGTTAA 975 0.3908 MHLTFKHFIPQFLSAFKNNITILLSAYTHFIMSFFLFVILILMVPSSNAYWPPSPGYWPSSKFRSLSFYKGFTNLWGPQHQRLDQHALTIWLDRTSGSGFKSVRPFRSGYFGASIKLQPGYTAGVITAFYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFHLWFDPTKDFHHYAILWSPKEIIFLVDDVPIRRYTRKSDATFPLRPMWLYGSIWDASSWATEDGKYKADYRYQPFIAKYTNFKASGCTAYAPRWCHPVSASPYRSGGLTPQQNGAMRWVQRYHMVYNYCQDSKRDHRQTPECWG 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1172 324 Gene3D - 48 322 - -
Lal11g1172 324 PIRSF EndGlu_transf 25 324 IPR016455 GO:0010411|GO:0016762|GO:0042546
Lal11g1172 324 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 33 323 - -
Lal11g1172 324 Pfam Glycosyl hydrolases family 16 70 251 IPR000757 GO:0004553|GO:0005975
Lal11g1172 324 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 284 322 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Lal11g1172 324 SUPERFAMILY Concanavalin A-like lectins/glucanases 90 310 IPR013320 -
Lal11g1172 324 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 33 323 IPR044791 GO:0004553
Lal11g1172 324 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 47 259 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1172 Lal-Chr11 15456821 15460806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1172 32 322 Glycoside Hydrolase AT3G44990 64.948 3.64e-142 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1172 K08235 - gmx:100796698 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1172 11 15456821 15460806 Lal11g1172 11 15456821 15460806 ECH