Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1161 ATGGAGAATTCAAGGTTTAAGAGGATTTGTGTGTTCTGTGGTAGTAGCCCTGGCAAGAAGAGTAGCTATCATGATGCTGCCATTCAACTTGGCAATGAATTGGTATCAAGGAACATTGATTTGGTGTATGGAGGTGGAAGTATTGGTCTAATGGGTTTGGTTTCACAAGCTGTTCATGATGGTGGCAGGCATGTCATTGGAGTTATTCCCAAGACACTCATGCCTAGAGAGATAACTGGTGAAACAGTAGGAGAAGTAAAAGCTGTAGCAGATATGCACCAAAGAAAAGCAGAGATGGCTAAACATTCAGATGCTTTTATTGCCTTACCAGGTGGTTATGGTACTTTAGAGGAGCTTCTTGAAGTTATAACATGGGCTCAACTTGGGATTCATGACAAGCCTGTAGGATTAGTAAATGTGGATGGATACTTCAATTCCTTGTTGTCATTTATTGACAAAGCTGTGGAAGAGGGATTTATAAGTCCAAATGCTAGCCACATAATTGTATCAGCACCAACAGCAAAAGAGTTAGTCAATAAATTGGAGGATTATGTTCCCTGTCATGAGGGTGATGCTTTAAAGTTGAGCTGGCAGATGGAACAGAAACTCACTTACCCTCAAGATTATGACATTTCCAGATAG 642 0.4065 MENSRFKRICVFCGSSPGKKSSYHDAAIQLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLVNVDGYFNSLLSFIDKAVEEGFISPNASHIIVSAPTAKELVNKLEDYVPCHEGDALKLSWQMEQKLTYPQDYDISR 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1161 213 TIGRFAM TIGR00730: TIGR00730 family protein 7 184 IPR005269 GO:0009691|GO:0016787
Lal11g1161 213 SUPERFAMILY MCP/YpsA-like 6 184 - -
Lal11g1161 213 Pfam Possible lysine decarboxylase 51 181 IPR031100 -
Lal11g1161 213 Gene3D - 1 183 - -
Lal11g1161 213 PANTHER LOG FAMILY PROTEIN YJL055W 3 213 - -
Lal11g1161 213 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 3 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1161 Lal-Chr11 15314291 15319402 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1161 K22522 - gmx:100810030 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1161 11 15314291 15319402 Lal11g1161 11 15314291 15319402 ECH
Lal11g1161 11 15314291 15319402 Lal1g1814 1 20485627 20491568 LSH