Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1102 ATGACAGAAATTCCATGGCCTCGTGATCAAGCATCTTCAAATTCCTATAATTCTAACAGCAGTGGTAGCAATGTTTTTAGTTTGCTAGCGCGGAGAGAGATTTCTCCCAGAACAAAACATGTAGCGAAAAGGCAATGGGGAGAAGCTTCTAAATCGAAATCTGGATCTTACTCTCGTCCTAAAAAAGAAGTATCAAGGGATGCAAGACGTGGCCTCCAATCATGGGTTGAGGCTGAGTCATTGCGACATTTGTCAGCTAAGTATTGCCCTTTGTTGCCTCCCCCGCGGTCTACTATTGCAGCAGCATTTAGTTCCGATGGAAAAGTTCTTGCATCAACACATGGTGACCACACTGTAAAGATAATTGACTGTGAAACTGGAAATTGCTTAAAGGTGTTGGTTGGCCATAAGAGGACACCTTGGGTGGTTAGATTCCATCCATTGCGTCCACAAATACTTGCTAGTGGGAGCTTAGATCAAGAAGTTCGTTTATGGGATGCTAACACATCAGAGTGCATAATATCTCATCACTTCTATCGTCCCATTGCGTCCATTGCTTTTCATGCCAAGGGGGAAATAATCGCCGTTGCATCAGGCCACAAGCTGTACATATGGCATTACAACAAGAAAGGGGAAGCATCCACACCGGTATTTGTGTTGAAGGCAAGGCGCTCACTTCGAGCTGTGCATTTTCACCCGCATGCTGCACCATATCTTTTAACTGCTGAGGTCAATGATCTTGACTCTTCAGATTCGTCAATGACAGAGGCAACATCTATTGGTTATTTACAATACCCTCCGCCTGTTGTTTTTGTTACAAATATTCATCCTAGGGAACATAGTAGTTTATCCAGTGAACTATCCTATGTGTCATTGCCTTTCTTCATCATGCCTTCATATACTGTTGACGAGTCAAGAGAATCGCAGCATGTTAGTCATGATGCGGTGGGTTCAGGTAGCACGCAAATTGAATCTTCTGCCACAGTGCAGTTTCAAGAGGACACAAACACAACAGAGCAATATGGTACAACAGTGTCTCCGATGGATACATTCTCCGAAGTGCCCACTAGCTCTCAAACTGGTACAGAATATCCTGCTCATACTGCTTTCTCTAATGGAGTGGGAATTGGCATCAGTAATCCCACAATGGATGGTATGGAGACGGATGAAACTGAACCAGCTGAAGGAACACAACATGGAAACTCTACTAATGCTCACTCTCTTAATGTTGTGCTAAATGGACTATCTAGGCAAACTGCCAATCGTGATGTTCCCTCAGAGATTGGTCAATTTCGTCAGTTTTACCCTTCAAGAGATCCAAGTGGATGGGAGTTACCTTTTCTGCAGGGATGGTTAATGGGTCAAAGCCAAGTTGGTGTTCCTTCAATGCTTCCTCACGTGGATTCTAATCGTGAAAGTGTAACTCAACAGGTAGGTCCGGCCAATCCTAATGTTCATGTGGCAATGCCTGGTAGCATCAGCATACCTGGATCTTCTGTGAGATCAGGTTTACGGAATCATTACTCACAATCCCGTATACTGGTATCCGGGTCTGGCAATCTTGCTGCTTCTGTTAATAACCTACATGATGGGTCTGATATCCAAACCTATATCAGTCATATCCAGTCGGAACATGCGACATCAATGGCTGCAGCTGCGGCCGCAGAGTTGCCTTGCACTGTGAAGTTAAGAGTATGGTCACATGACATAAAAAATCCATGTGCCTCACTAAATGCTGACAGATGTCGTCTAACCATACCACATGCTGTCCTCTGCAGTGAAATGGGTGCCCATTTTTCACCATGTGGTAGACTTTTAGCTGCCTGTGTTGCATGCATGCTTCCTCAGATAGAAGGTGATCCAAGATTACAAACTCCAGTACACCGAGAGCCTGGCATTGCGACATCACCAACTCGACATCCAATATCGGCGCACCAAGTCATGTATGAGCTGCGGATATATTCTCTTGAGGAGGCAACATTTGGTTCGGTGCTTGCTTCACGGGCAATTAGAGCAGCTCATTGTTTGACTTCAATTCAGTTCTCACCTACATCTGAACACATATTACTTGCCTATGGTCGGCGTCATGGTTCTTTACTTAAAAGCATTGTCATTGATGGAGAAGCAACGTTACCTATATACACAGTGTTAGAGGTATACAGAGTATCGGATATGGAACTTGTTAGGGTGCTTCCTAGTGCAGAAGATGAGGTCAACGTGGCATGCTTTCACCCTTTTGCTGGTGGAGGACTAGTTTATGGGACGAAAGAAGGAAAGCTTAGAGTCCTCCAGTATGATGGTGCACAAGCTGCGAGCGGCACCGGACCAAGTTACTTTCCTGAAGATAGCATCATAGGAATCAGTCAGTGA 2370 0.4473 MTEIPWPRDQASSNSYNSNSSGSNVFSLLARREISPRTKHVAKRQWGEASKSKSGSYSRPKKEVSRDARRGLQSWVEAESLRHLSAKYCPLLPPPRSTIAAAFSSDGKVLASTHGDHTVKIIDCETGNCLKVLVGHKRTPWVVRFHPLRPQILASGSLDQEVRLWDANTSECIISHHFYRPIASIAFHAKGEIIAVASGHKLYIWHYNKKGEASTPVFVLKARRSLRAVHFHPHAAPYLLTAEVNDLDSSDSSMTEATSIGYLQYPPPVVFVTNIHPREHSSLSSELSYVSLPFFIMPSYTVDESRESQHVSHDAVGSGSTQIESSATVQFQEDTNTTEQYGTTVSPMDTFSEVPTSSQTGTEYPAHTAFSNGVGIGISNPTMDGMETDETEPAEGTQHGNSTNAHSLNVVLNGLSRQTANRDVPSEIGQFRQFYPSRDPSGWELPFLQGWLMGQSQVGVPSMLPHVDSNRESVTQQVGPANPNVHVAMPGSISIPGSSVRSGLRNHYSQSRILVSGSGNLAASVNNLHDGSDIQTYISHIQSEHATSMAAAAAAELPCTVKLRVWSHDIKNPCASLNADRCRLTIPHAVLCSEMGAHFSPCGRLLAACVACMLPQIEGDPRLQTPVHREPGIATSPTRHPISAHQVMYELRIYSLEEATFGSVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGEATLPIYTVLEVYRVSDMELVRVLPSAEDEVNVACFHPFAGGGLVYGTKEGKLRVLQYDGAQAASGTGPSYFPEDSIIGISQ 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1102 789 SMART WD40_4 126 166 IPR001680 GO:0005515
Lal11g1102 789 SMART WD40_4 724 764 IPR001680 GO:0005515
Lal11g1102 789 SMART WD40_4 169 206 IPR001680 GO:0005515
Lal11g1102 789 SMART WD40_4 85 123 IPR001680 GO:0005515
Lal11g1102 789 Gene3D - 80 254 IPR015943 GO:0005515
Lal11g1102 789 ProSiteProfiles Trp-Asp (WD) repeats profile. 133 175 IPR001680 GO:0005515
Lal11g1102 789 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 1 788 - -
Lal11g1102 789 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 133 171 - -
Lal11g1102 789 MobiDBLite consensus disorder prediction 36 69 - -
Lal11g1102 789 ProSitePatterns Trp-Asp (WD) repeats signature. 153 167 IPR019775 -
Lal11g1102 789 MobiDBLite consensus disorder prediction 1 23 - -
Lal11g1102 789 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 96 766 IPR011047 -
Lal11g1102 789 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 1 788 - -
Lal11g1102 789 Pfam WD domain, G-beta repeat 127 166 IPR001680 GO:0005515
Lal11g1102 789 MobiDBLite consensus disorder prediction 55 69 - -
Lal11g1102 789 MobiDBLite consensus disorder prediction 384 403 - -
Lal11g1102 789 MobiDBLite consensus disorder prediction 333 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1102 Lal-Chr11 14696999 14705010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1102 100 267 Miscellaneous Gene Families AT5G08390 24.862 1.20e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1102 - K17985 gmx:100817857 1312.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1102 11 14696999 14705010 Lal11g1102 11 14696999 14705010 ECH