Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1012 ATGGGTTTTTACCTAATTCCCATTATTCCCCATATTACCCTCACTACTTTCTTCTATTTACTCCTCCTATCACCACCACTCCCCACCCTCTCCCTCAACCTCACCGCCATCCTCTCCACTTTCCCCGATTTCTCCCAATTCACTTCCCTCCTCTCCTCCGCCACCTCCCTCTCCTCCGACCTCTCCGACCGCACCTCCCTCTCTCTCCTCGCCGTCCCTAACTCCTTCCTCAACTCCCCTTCCTCCCCTCTCCTCATCCATCAAATCACTCCCTCCGACATCCCCGACATCCTCCGCTACCACGTCCTCCTCCAATTCCTCTCCTGGTCCGACCTCCGCTCCCTCCCGCCGTCTGGCAAACTCATCACCACCCTCCTCCAAACCACCGGCCGTGCCCCGAACAACCTCGGATCCGTGAACCTCACGCGCGACCCTGATTCCAATGTCATCTCGATTCATTCACCTTCTCCTTATTCCTCTTATAACGCCACCGTTTTATCACTCGTTAAAACCCTTCCGTACAATATAACCGTTTTTTCTATTAATTCCCTTCTTATCCCTTCTGGTTTCAATCTCATGGCTTCGGATACAAGACCTAATTTAGGTCTTAACATTACGAAGGCTTTAATCGATGGTCACAATTTCAATGTTGCTGCGTCGCTTCTTTCAGCTTCTGGTGTTGTTGAAGAATTCGAAAACGATGAAGGTGGAGCTGGAATCACGTTATTTGTTCCCGTCGACGATGCTTTCGCCGATCTTCCACCGTCGGCGAGTTTTCAATCACTACCGGCGGATAAGAAAGCTGTTGTGCTCAAATTTCATGTTCTACATTCCTATTACCCCTTGGGATCATTGGAATCCATTGTGAACCCGGTTCAACCTACGCTCGCTACTGAAACCATGGGTGCTGGGAGCTTCACGCTTAACATTTCACGGCTGAATGGATCGGTTGCAATTAACACCGGAATTGTACAAGCCACTGTTACTCGAACCGTTTTCGATCAGAATCCGATTGCCATTTTCGGCATTTCGAAGGTTCTGTTACCTGTAGAGATGTTTGGGAAGAATCCAGTTGCGCCATCGAAGCCTGGTGGGCTGGTTCAGGAGGCGCCATCCCCGGATAGTGATGCTATGTCACCAGAGAATTCACCGGGATTCATTGACCAACCGTCGCACCTTTCCTCTCCGCCGGGTTTTGGCCAAGATGTTGGGTCCAAAGCTGTTGCTAATGTTGTTTATGGTTTCAAATCTATTGTTATGCAATACCTAGGTTCCGAGGAGCGCGGGAGTTTACAGAGCTGGCTAGCTATCATACTATATGATCATCAGGAACTCAGTTTCATTTATTCGTTATATGACACTGCACTTTCCTTTTTACGCAGCCACTAA 1389 0.4917 MGFYLIPIIPHITLTTFFYLLLLSPPLPTLSLNLTAILSTFPDFSQFTSLLSSATSLSSDLSDRTSLSLLAVPNSFLNSPSSPLLIHQITPSDIPDILRYHVLLQFLSWSDLRSLPPSGKLITTLLQTTGRAPNNLGSVNLTRDPDSNVISIHSPSPYSSYNATVLSLVKTLPYNITVFSINSLLIPSGFNLMASDTRPNLGLNITKALIDGHNFNVAASLLSASGVVEEFENDEGGAGITLFVPVDDAFADLPPSASFQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATETMGAGSFTLNISRLNGSVAINTGIVQATVTRTVFDQNPIAIFGISKVLLPVEMFGKNPVAPSKPGGLVQEAPSPDSDAMSPENSPGFIDQPSHLSSPPGFGQDVGSKAVANVVYGFKSIVMQYLGSEERGSLQSWLAIILYDHQELSFIYSLYDTALSFLRSH 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1012 462 MobiDBLite consensus disorder prediction 375 398 - -
Lal11g1012 462 Gene3D FAS1 domain 203 350 IPR036378 -
Lal11g1012 462 Pfam Fasciclin domain 214 349 IPR000782 -
Lal11g1012 462 Gene3D FAS1 domain 31 187 IPR036378 -
Lal11g1012 462 ProSiteProfiles FAS1/BIgH3 domain profile. 202 347 IPR000782 -
Lal11g1012 462 ProSiteProfiles FAS1/BIgH3 domain profile. 31 185 IPR000782 -
Lal11g1012 462 SMART fasc_3 241 350 IPR000782 -
Lal11g1012 462 SUPERFAMILY FAS1 domain 37 187 IPR036378 -
Lal11g1012 462 SUPERFAMILY FAS1 domain 209 350 IPR036378 -
Lal11g1012 462 MobiDBLite consensus disorder prediction 361 400 - -
Lal11g1012 462 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 9 411 - -
Lal11g1012 462 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 9 411 IPR033254 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1012 Lal-Chr11 13656682 13659234 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1012 - - ccaj:109812902 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1012 11 13656682 13659234 Lal11g1012 11 13656682 13659234 ECH