Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0710 ATGAGTACCGTTCCAAAAGAAACAATTGAAGTAATCGCACAAACCATTGGCATCACCAATTTATCCCCTGATGTTGCTCTCGCTCTCGCTCCCGATCTCGAGTATCGGATTCGTGAAATCATGCAGGAGTCCATAAAATGCATGCGCCACTCAAAGAGAACTTTTCTTGCTACAGAGGATGTGGATAGTGCACTTGCATTGAGAAATTTAGAGCCCATATATGGTTTCACATCTAATGATCCCATGCGGTTCAGAAGAGCTGCTGGACACAAGGATTTGTTCTATGTTGATGACAAAGATGTGGACTTTAAAGATCTGATTGAAGCACCTTTACCAAAAGCACCCCTTGATACATCGGTTACCAGTCACTGGCTGGCTATTGAAGGTGTACAGCCTGCAATTCCTGAAAATGCTCCAGCTGAAGCTCCCTCTGAGATAAGAAAACCAGAATATAAGGAAGATGGACTTCCTGTTGATGTAAAATTACCCATTAAACATGTAATAACAAAGGAGCTCCAGCTTTACTATGACAAAATAACTGAGCTGGTTTTAAAAAAGCCTGGCTCTATTCCCTTTAGAAGAGCATTAGTTAGCCTGGCAACGGACTCAGGACTCCATCCTTTGGTTCCTTACTTGTCACGCTTTGTAGCTGATGAGGTGGCACAAAATTTAAATAATTTACCACTTCTATTTGCCTTGATGCGTCTTGTGCGTAGCCTTCTGCAGAATCCTCACATACATATAGAACTTTATCTACATCAACTGATGCCTCCTATCATTACCTGCATTGTTGCAAAAAGGATAGGAAACAGACTATCTGATACGCACTGGGAGCTTAGGAGCTTCAGTGCTAATATTGTTGCTTCAATATGCAAAAGATTTGGGCATGTTTATCACAATCTTCAGCCACGGGTGACAAAGACATTTCTTCATGCTTTCTTAGACCCTACAAAAAGTCTGCCTCAACACTATGGTGCAATAAAAGGGATAGCAGCTCTTGGATCAAGAATGGTTCGCTCGCTTATTATTCCAAATCTCAAACCATATTTGCATCTTCTTGAGCCAGAAATGCAACTTGAGAAGCAAAAAAATGAAATAAAGAGGCATGCTGCATGTCAAGTTTATGGGGCCTTGCTGTGTGCTGTAGGCCAATGTATGCATGAAAAGTTCAAAGAATTCAGCAGTTTTCTGTCTCCAATTAATGCTACTTCAAGAGGCAATGAAAAAGTCATGGCTGCAATGCCAGGCAAACGTAAAGCCACTACAGACAATCTAATGCAGCAGCAACCTCCACTGAAGAAAATTGCTGTCGATGGCCCTATGGGTTTGATACCGATGAACTCCACCATGATGGGGGTTTCTAACGTTGGCATGTCATCAACGGGTCGTCAATTAGCAAATGACAACATGCCAGGGAGAGAGGTTGAAGGTCAACAGTCTAAGGCATCTTCCATTCTTGCTCAAGCTTGGAAGGATGACATGGATTCAGGTCATTTGCTGTCCACACTGTTTGAATTATTTGGTGAGAGTCTGTTGTCATATATTCCAAAACCGGAAGCATGTATATTTTTGTAA 1575 0.4184 MSTVPKETIEVIAQTIGITNLSPDVALALAPDLEYRIREIMQESIKCMRHSKRTFLATEDVDSALALRNLEPIYGFTSNDPMRFRRAAGHKDLFYVDDKDVDFKDLIEAPLPKAPLDTSVTSHWLAIEGVQPAIPENAPAEAPSEIRKPEYKEDGLPVDVKLPIKHVITKELQLYYDKITELVLKKPGSIPFRRALVSLATDSGLHPLVPYLSRFVADEVAQNLNNLPLLFALMRLVRSLLQNPHIHIELYLHQLMPPIITCIVAKRIGNRLSDTHWELRSFSANIVASICKRFGHVYHNLQPRVTKTFLHAFLDPTKSLPQHYGAIKGIAALGSRMVRSLIIPNLKPYLHLLEPEMQLEKQKNEIKRHAACQVYGALLCAVGQCMHEKFKEFSSFLSPINATSRGNEKVMAAMPGKRKATTDNLMQQQPPLKKIAVDGPMGLIPMNSTMMGVSNVGMSSTGRQLANDNMPGREVEGQQSKASSILAQAWKDDMDSGHLLSTLFELFGESLLSYIPKPEACIFL 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0710 524 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 1 524 IPR037796 GO:0000124|GO:0005669|GO:0006367|GO:0016251|GO:0046695
Lal11g0710 524 SUPERFAMILY Histone-fold 2 65 IPR009072 GO:0046982
Lal11g0710 524 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 1 524 - -
Lal11g0710 524 SMART TAF_cls 2 68 IPR004823 -
Lal11g0710 524 CDD TAF6C 165 381 IPR011442 GO:0006367
Lal11g0710 524 Pfam TATA box binding protein associated factor (TAF) 1 65 IPR004823 -
Lal11g0710 524 Pfam TAF6 C-terminal HEAT repeat domain 259 347 IPR011442 GO:0006367
Lal11g0710 524 Gene3D Histone, subunit A 1 66 IPR009072 GO:0046982
Lal11g0710 524 Gene3D - 164 369 IPR046344 GO:0006367
Lal11g0710 524 SUPERFAMILY ARM repeat 172 384 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0710 Lal-Chr11 6951594 6960495 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0710 K03131 - gmx:100799998 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0710 11 6951594 6960495 Lal11g0710 11 6951594 6960495 ECH