Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0111 ATGAGGTCCCCATACCTTGTGATCACAACCATTTTATTCATCATGATCTCAACTTGCTTAGCTCAAAACACCCCTGAAGACTTCCTTAAGGTACACAATCAAGCCAGGAAAGAGGTTGGTGTTGGTCCACTCTCTTGGAACAAAACCCTTGAAGCCTATGCTCAGAACTATGCAAATGGGAAGATTAAAGACTGCAAAATGGAGCACTCTAATGGGCCATATGGTGAGAATCTGGCTGAGGGTTATGGTGAGATGAAGGGTTCAGATGCTGTGAAGTTCTGGCTCACTGAGAAACCTAACTATGATTATAAGTCTAATTCATGTGTAAATGATGAGTGTGGCCATTATACTCAAATTGTTTGGCGTAATTCTGTTCATCTTGGATGTGCTAGAGTTAAGTGTGACAATAACTGGGTCTTTGTTATTTGTAGCTATTCTCCACCGGGCAATGTTATCGGTGAACGACCTTATTGA 474 0.4156 MRSPYLVITTILFIMISTCLAQNTPEDFLKVHNQARKEVGVGPLSWNKTLEAYAQNYANGKIKDCKMEHSNGPYGENLAEGYGEMKGSDAVKFWLTEKPNYDYKSNSCVNDECGHYTQIVWRNSVHLGCARVKCDNNWVFVICSYSPPGNVIGERPY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0111 157 Gene3D CAP 23 157 IPR035940 -
Lal11g0111 157 SMART SCP_3 23 153 IPR014044 -
Lal11g0111 157 SUPERFAMILY PR-1-like 22 157 IPR035940 -
Lal11g0111 157 CDD CAP_PR-1 25 157 - -
Lal11g0111 157 PANTHER - 17 157 - -
Lal11g0111 157 ProSitePatterns CRISP family signature 1. 114 124 IPR018244 GO:0005576
Lal11g0111 157 ProSitePatterns CRISP family signature 2. 140 151 IPR018244 GO:0005576
Lal11g0111 157 Pfam Cysteine-rich secretory protein family 29 145 IPR014044 -
Lal11g0111 157 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 17 157 IPR001283 -
Lal11g0111 157 PRINTS Allergen V5/Tpx-1 family signature 44 62 IPR001283 -
Lal11g0111 157 PRINTS Allergen V5/Tpx-1 family signature 90 103 IPR001283 -
Lal11g0111 157 PRINTS Allergen V5/Tpx-1 family signature 113 129 IPR001283 -
Lal11g0111 157 PRINTS Allergen V5/Tpx-1 family signature 140 153 IPR001283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0111 Lal-Chr11 743431 743904 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0111 K13449 - gmx:100527778 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0111 11 743431 743904 Lal11g0111 11 743431 743904 ECH
Lal5g1784 5 19784272 19784745 Lal11g0111 11 743431 743904 LSH