Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g0110 ATGAGGTCCCCATACCTTGTGATCACAACCATTTTGTTCATCATGATCTCAACTTGCTTAGCCCAAAACACCCCTGAAGACTACCTTGAGGTACACAACCAAGCCAGGGAAGAGGTTGGTGTTGGTCCACTAACGTGGAACAAAACCCTTGAAGACTATGCTCAGAACTATGCAAATGGGAGGATTAAAGACTGCAAAATGGAGCACTCTAATGGGCCATATGGTGAGAATTTGGCTGAGGGTTATGGTGAGATGACAGGTTCAGATGCTGTGAAGTTTTGGCTCACTGAGAAGCCTAACTATGATCCTATTTCTAATTCATGTGTAAATGATGAGTGTGGCCATTATACTCAGATTGTGTCGCGTAATTCTGTTTATCTTGGATGTGCTAGAGTTAACCTATTTGGGATAACAAACTCTTTGATGGCGGAGTTTAAGGCAACTATGATGGCTATAGAAATTGCTTATTTGAAAGGGTGGAGGGATATTTGGATTGAGTGTGATTCAGCTTTGGTGGTGGACATCTTCAATGGGAAAGGCAAGATTCCTTGA 552 0.4239 MRSPYLVITTILFIMISTCLAQNTPEDYLEVHNQAREEVGVGPLTWNKTLEDYAQNYANGRIKDCKMEHSNGPYGENLAEGYGEMTGSDAVKFWLTEKPNYDPISNSCVNDECGHYTQIVSRNSVYLGCARVNLFGITNSLMAEFKATMMAIEIAYLKGWRDIWIECDSALVVDIFNGKGKIP 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g0110 183 Gene3D CAP 19 151 IPR035940 -
Lal11g0110 183 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 17 133 IPR001283 -
Lal11g0110 183 SUPERFAMILY Ribonuclease H-like 114 178 IPR012337 -
Lal11g0110 183 SUPERFAMILY PR-1-like 22 134 IPR035940 -
Lal11g0110 183 Pfam Cysteine-rich secretory protein family 29 133 IPR014044 -
Lal11g0110 183 Pfam Reverse transcriptase-like 122 180 IPR002156 GO:0003676|GO:0004523
Lal11g0110 183 CDD CAP_PR-1 25 132 - -
Lal11g0110 183 SMART SCP_3 23 142 IPR014044 -
Lal11g0110 183 PRINTS Allergen V5/Tpx-1 family signature 44 62 IPR001283 -
Lal11g0110 183 PRINTS Allergen V5/Tpx-1 family signature 90 103 IPR001283 -
Lal11g0110 183 PRINTS Allergen V5/Tpx-1 family signature 113 129 IPR001283 -
Lal11g0110 183 PANTHER - 17 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g0110 Lal-Chr11 737145 740626 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g0110 K13449 - gmx:100527778 197.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g0110 11 737145 740626 Lal11g0110 11 737145 740626 ECH