Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1173 ATGGGGAAGAGGCCGCCATACACCACGGATATTGAGGCTGCCCGCTACCCTCCACCACCGCCACCTACCTTTCGTCCGCAGCCTCCTACGCAATGGACCCCGTGGCTGGTTCCACTCATTTTTGTAGCCAATGTTGCAATGTTCGTGTATAGCATGTACCTCAATGATTGCCCTTCACATTTGGACAAAGATGAATGCCTTTTCACCCAACAACTTGGAACATTTGCTTTCCAACCTTTCAAGGAAAACCCTCTCCTTGGCCCTTCCACCTCCACGTTGCGTAAATTAGGAGCTCTCGAAAAGGATCTAGTGGTGTACGACAATGAACCATGGCGCTTTGTTACCTGCATGTTTCTTCATGCTGGAGTAGTGCATTTACTCGCTAACATGTTCAGTCTTCTATTTATAGGAGTTCGGCTTGAACAGGAATTTGGATTTTTGAGAATTGGATTGTTATATATGCTTTCTGGTTTCGGTGGAAGTTTGTTATCTGTTCTGCATTTGAAACATTCTGCAATAGTACAAACCATATCAGTTGGTGCATCTGGTGCACTTTTTGGTCTTCTAGGATCCATGCTTTCTGAACTTCTAACCAACTGGACAATCTATGCAAATAAGTGTGCAGCTCTCATAAGTCTGGTGGTCATCATTGGCTTAAATTTGGCTGTTGGATTTCTACCTCATGTGGACAATTCAGCTCACATAGGAGGATTCCTAGCAGGATTTTTCCTTGGTTTTGTTCTTCTAATGCGCCCTCAATATGGATATGTAAACCGCAAATACATACCGTCAGGGTACGATATAAAACGTAAATCAAAGTATAGATGGTATCAGTATTTCTTCCTGGTTCTATCATTGATCATCTTGCTTCTTGGGCACATGATTATTCAAGGTCCATCCAGAAGAAACAGAGCCAATTTCAGTACATGGGATGATTTGGGATATGTATCTATTTGGCTTCTTATTTGGATAGAGGAAGTTCTTGAATGCTAA 993 0.426 MGKRPPYTTDIEAARYPPPPPPTFRPQPPTQWTPWLVPLIFVANVAMFVYSMYLNDCPSHLDKDECLFTQQLGTFAFQPFKENPLLGPSTSTLRKLGALEKDLVVYDNEPWRFVTCMFLHAGVVHLLANMFSLLFIGVRLEQEFGFLRIGLLYMLSGFGGSLLSVLHLKHSAIVQTISVGASGALFGLLGSMLSELLTNWTIYANKCAALISLVVIIGLNLAVGFLPHVDNSAHIGGFLAGFFLGFVLLMRPQYGYVNRKYIPSGYDIKRKSKYRWYQYFFLVLSLIILLLGHMIIQGPSRRNRANFSTWDDLGYVSIWLLIWIEEVLEC 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1173 330 PANTHER RHOMBOID-RELATED 1 295 IPR002610 GO:0004252|GO:0006508|GO:0016021
Lal10g1173 330 MobiDBLite consensus disorder prediction 1 25 - -
Lal10g1173 330 PANTHER RHOMBOID-LIKE PROTEIN 5 1 295 - -
Lal10g1173 330 SUPERFAMILY Rhomboid-like 30 253 IPR035952 -
Lal10g1173 330 Pfam Rhomboid family 106 252 IPR022764 GO:0004252|GO:0016021
Lal10g1173 330 Gene3D - 30 253 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1173 Lal-Chr10 18305275 18307517 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1173 - - gmx:100816530 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1173 10 18305275 18307517 Lal10g1173 10 18305275 18307517 ECH
Lal10g1173 10 18305275 18307517 Lal8g0016 8 224820 227424 LSH